Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0681 and Atu8056 are separated by 208 nucleotidesAtu8056 and Atu0682 are separated by 62 nucleotidesAtu0682 and Atu0683 are separated by 75 nucleotidesAtu0683 and Atu0684 are separated by 369 nucleotides Atu0681: Atu0681 - hypothetical protein, at 675,290 to 675,724 Atu0681 Atu8056: Atu8056 - hypothetical protein, at 675,933 to 676,265 Atu8056 Atu0682: Atu0682 - GroEL chaperonin, at 676,328 to 677,962 Atu0682 Atu0683: Atu0683 - co-chaperonin GroES, at 678,038 to 678,334 Atu0683 Atu0684: Atu0684 - hypothetical protein, at 678,704 to 679,552 Atu0684
Group Condition Atu0681 Atu8056 Atu0682 Atu0683 Atu0684
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -5.3 N.D. N.D. +0.1
phage AgroPhage_H04 -0.6 -2.4 N.D. N.D. -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -2.6 N.D. N.D. -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -2.5 N.D. N.D. -0.4
phage AgroPhage_D10 -0.8 -1.4 N.D. N.D. -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -2.0 N.D. N.D. -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -2.6 N.D. N.D. +0.0
lb_sorghum f72 f505 LB_Sorghum F72 F505 -0.2 -2.2 N.D. N.D. -0.2
stress R2A with Vancomycin 0.009 mM -0.4 -0.9 N.D. N.D. -1.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -1.7 N.D. N.D. -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 -1.9 N.D. N.D. +0.1
nitrogen source 5-Aminolevulinic (N) -0.4 -2.1 N.D. N.D. +0.1
lb LB -0.0 -1.7 N.D. N.D. -0.4
phage AgroPhage_B07 -0.7 -1.1 N.D. N.D. -0.3
phage AgroPhage_F10 -0.9 -0.6 N.D. N.D. -0.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.9 N.D. N.D. -0.8
lb_sorghum_leaf LB_sorghum_leaf -0.1 -1.3 N.D. N.D. -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.1 -1.8 N.D. N.D. -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -2.0 N.D. N.D. +0.0
lb_sorghum_leaf LB_sorghum_leaf -0.1 -1.9 N.D. N.D. +0.1
nitrogen source 4-Aminobutyric (N) -0.2 -1.8 N.D. N.D. +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.7 N.D. N.D. -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -1.6 N.D. N.D. +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -1.3 N.D. N.D. -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -1.2 N.D. N.D. +0.6
phage Phage 95.2 + bacteria -0.3 +1.1 N.D. N.D. -0.6
phage Phage 95.3 + bacteria -0.4 +1.3 N.D. N.D. -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +1.4 N.D. N.D. -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +3.0 N.D. N.D. -0.5
nitrogen source DL-2-Aminobutyric (N) +1.0 +0.0 N.D. N.D. +1.2
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