Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0672 and Atu0673 are separated by 25 nucleotidesAtu0673 and Atu0674 are separated by 6 nucleotidesAtu0674 and Atu0675 overlap by 17 nucleotidesAtu0675 and Atu0676 are separated by 156 nucleotides Atu0672: Atu0672 - transcriptional regulator, LysR family, at 668,543 to 669,460 Atu0672 Atu0673: Atu0673 - hypothetical protein, at 669,486 to 670,250 Atu0673 Atu0674: Atu0674 - hypothetical protein, at 670,257 to 670,526 Atu0674 Atu0675: Atu0675 - hypothetical protein, at 670,510 to 670,737 Atu0675 Atu0676: Atu0676 - histidyl-tRNA synthetase, at 670,894 to 672,417 Atu0676
Group Condition Atu0672 Atu0673 Atu0674 Atu0675 Atu0676
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.0 -1.1 N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.3 -0.8 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.2 -0.7 N.D. N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 -0.8 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.4 -0.3 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 -0.9 N.D. N.D.
phage AgroPhage_F03 +0.2 -0.2 -1.2 N.D. N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 -0.9 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 -0.7 N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.2 -0.8 N.D. N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 -1.0 N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.5 -1.1 N.D. N.D.
phage AgroPhage_E04 +0.2 +0.1 -0.9 N.D. N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.3 -0.8 N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.6 +0.1 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.3 -0.6 N.D. N.D.
no phage P2L5 +0.3 +0.3 -0.6 N.D. N.D.
carbon source D-Glucosamine Hydrochloride (C) -0.2 -0.4 +0.6 N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +0.1 +0.5 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 -0.1 -0.6 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 -0.5 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.3 +0.7 N.D. N.D.
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -0.1 +0.3 +0.8 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.7 +0.0 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 +0.1 +0.4 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 +0.9 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.5 +0.7 N.D. N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.4 +0.5 N.D. N.D.
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM +0.0 +0.2 +1.4 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 +1.5 N.D. N.D.
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