Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0664 and Atu0665 are separated by 111 nucleotidesAtu0665 and Atu0666 are separated by 235 nucleotidesAtu0666 and Atu0667 are separated by 15 nucleotidesAtu0667 and Atu0668 overlap by 4 nucleotides Atu0664: Atu0664 - transcriptional regulator, LysR family, at 659,193 to 660,092 Atu0664 Atu0665: Atu0665 - glycolate oxidase subunit, at 660,204 to 661,637 Atu0665 Atu0666: Atu0666 - glycolate oxidase subunit, at 661,873 to 663,075 Atu0666 Atu0667: Atu0667 - glycolate oxidase iron-sulfur subunit, at 663,091 to 664,392 Atu0667 Atu0668: Atu0668 - hypothetical protein, at 664,389 to 665,048 Atu0668
Group Condition Atu0664 Atu0665 Atu0666 Atu0667 Atu0668
carbon source L-Xylose (C) -1.9 -2.3 -2.4 -2.3 -0.1
carbon source L-Xylose (C) -2.0 -2.2 -1.7 -1.9 -0.0
carbon source Dihydroxyacetone (C) -0.4 -1.3 -1.2 -1.2 -0.2
carbon source Dihydroxyacetone (C) -0.4 -1.4 -0.9 -1.2 +0.2
carbon source acetate (C) -2.9 -0.2 -0.2 +0.0 +0.0
carbon source acetate (C) -2.8 -0.1 -0.2 -0.0 -0.1
carbon source L-(+)-Erythrulose (C) -0.6 -1.1 -0.5 -0.7 -0.2
carbon source L-(+)-Erythrulose (C) -0.6 -0.8 -0.7 -0.7 -0.0
carbon source Ethyl benzoate (C) -2.4 -0.1 -0.0 -0.0 +0.1
carbon source Glutaric (C) -2.2 +0.1 -0.1 -0.0 +0.0
carbon source Ethyl benzoate (C) -2.0 -0.1 +0.0 +0.0 +0.0
carbon source Glutaric (C) -2.0 -0.1 -0.0 +0.0 +0.2
carbon source Beta-alanine (C) -1.5 -0.1 +0.1 -0.1 -0.2
carbon source 3-aminobenzoate (C) -1.8 -0.2 +0.1 +0.1 -0.0
carbon source Adipic (C) -1.7 -0.0 +0.0 +0.0 -0.0
carbon source Adipic (C) -1.7 +0.0 +0.1 -0.0 -0.0
Atjh14 -0.4 +0.2 -0.9 -0.0 -0.4
carbon source cholate (C) -1.6 -0.1 +0.1 +0.1 -0.1
carbon source 1,5-Pentanediol (C) -1.6 -0.0 +0.0 +0.2 -0.1
carbon source cholate (C) -1.7 +0.1 +0.2 -0.0 +0.1
carbon source N-alpha-Acetyl-L-glutamate (C) -1.3 -0.2 +0.0 -0.1 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.9 -0.6 -0.2 +0.4
carbon source anthranilamide (C) -1.3 -0.2 +0.1 -0.0 +0.3
carbon source 1,5-Pentanediol (C) -1.6 -0.1 +0.2 +0.0 +0.3
carbon source sarcosine (C) -1.3 -0.1 -0.0 +0.2 +0.1
stress R2A with Vancomycin 0.009 mM -0.7 +0.4 +0.3 +0.3 -0.8
phage AgroPhage_C10 +0.2 +0.2 +0.8 +0.1 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +0.0 -0.3 -0.2 +0.5
carbon source L-ascorbate (C) -0.5 +1.0 +1.2 +1.1 +0.2
carbon source L-ascorbate (C) -0.1 +1.5 +1.7 +1.4 -0.1
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