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Cofit
Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu0657 and Atu0658 are separated by 36 nucleotides
Atu0658 and Atu0659 are separated by 162 nucleotides
Atu0659 and Atu0660 are separated by 257 nucleotides
Atu0660 and Atu0661 overlap by 4 nucleotides
Atu0657: Atu0657 - hypothetical protein, at 651,334 to 652,053
Atu0657
Atu0658: Atu0658 - phosphate permease, at 652,090 to 653,595
Atu0658
Atu0659: Atu0659 - NTP pyrophosphohydrolase, MutT family, at 653,758 to 654,237
Atu0659
Atu0660: Atu0660 - hydrolase, at 654,495 to 655,241
Atu0660
Atu0661: Atu0661 - glycosyltransferase, at 655,238 to 656,575
Atu0661
Group
Condition
Atu0657
Atu0658
Atu0659
Atu0660
Atu0661
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
-1.1
-5.8
-0.4
-0.2
lb
LB
-0.4
-1.7
-5.2
+0.1
+0.0
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
-0.8
-5.7
-0.1
+0.3
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.5
-1.0
-5.5
-0.3
-0.2
lb
LB
-0.2
-1.8
-4.6
+0.1
+0.1
lb_maize
LB_Maize
-0.2
-0.6
-5.6
-0.0
+0.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.5
-5.7
-0.0
-0.1
lb_wheat
LB_wheat
-0.1
-0.8
-5.4
+0.1
+0.0
lb_wheat
LB_wheat
-0.1
-0.5
-5.4
-0.1
-0.0
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
-0.9
-4.8
-0.5
-0.2
lb control
LB control
-0.1
-0.6
-5.1
-0.2
+0.0
lb_maize
LB_Maize
+0.0
-0.6
-5.2
-0.1
-0.0
lb_wheat
LB_wheat
+0.0
-0.7
-5.1
-0.1
+0.1
lb_maize
LB_Maize
-0.0
-0.8
-4.9
-0.0
-0.0
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.6
-4.7
-0.2
-0.3
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.6
-5.0
+0.2
-0.0
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
-0.8
-4.3
-0.1
-0.2
lb control
LB control
-0.1
-0.5
-4.7
-0.1
+0.0
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.4
-4.7
-0.3
-0.0
carbon source
D-Mannitol (C)
-0.2
-1.2
-4.2
+0.1
+0.1
carbon source
D-Mannose (C)
-0.4
-0.9
-3.9
+0.1
-0.0
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.7
-4.8
+0.3
+0.0
lb_wheat
LB_wheat
-0.2
-0.4
-4.3
-0.1
-0.0
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.0
-0.8
-4.1
-0.1
+0.1
carbon source
L-Arabinose (C)
-0.0
-1.0
-3.8
+0.1
-0.1
carbon source
D-Mannitol (C)
-0.2
-1.3
-3.7
+0.2
+0.1
carbon source
D-Ribose (C)
+0.1
-0.8
-3.3
-0.9
+0.1
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.3
-4.9
+0.5
-0.0
stress
Erythromycin 12.5 ug/mL
+2.5
-0.5
-1.5
-1.0
-0.6
stress
Erythromycin 12.5 ug/mL
+2.3
-0.4
-1.7
-0.4
-0.6
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