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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu0648 and Atu0649 are separated by 168 nucleotides
Atu0649 and Atu0650 are separated by 152 nucleotides
Atu0650 and Atu0651 are separated by 119 nucleotides
Atu0651 and Atu0652 are separated by 76 nucleotides
Atu0648: Atu0648 - hypothetical protein, at 638,958 to 641,282
Atu0648
Atu0649: Atu0649 - cyclopropane-fatty-acyl-phospholipid synthase, at 641,451 to 642,707
Atu0649
Atu0650: Atu0650 - hypothetical protein, at 642,860 to 643,660
Atu0650
Atu0651: Atu0651 - 4-hydroxybenzoate octaprenyltransferase, at 643,780 to 644,733
Atu0651
Atu0652: Atu0652 - hypothetical protein, at 644,810 to 645,376
Atu0652
Group
Condition
Atu0648
Atu0649
Atu0650
Atu0651
Atu0652
nitrogen source
D-Lysine (N)
-0.1
-2.4
-0.1
N.D.
N.D.
stress
R2A with Vancomycin 0.009 mM
-0.7
+0.3
-2.1
N.D.
N.D.
stress
R2A with m-arsenite 0.8 mM
-0.1
-1.9
-0.2
N.D.
N.D.
stress
R2A with Vancomycin 0.009 mM
-0.8
+0.4
-1.8
N.D.
N.D.
stress
Chloramphenicol 12.5 ug/mL
-0.4
-1.9
+0.2
N.D.
N.D.
stress
Chloramphenicol 12.5 ug/mL
-0.5
-1.1
-0.1
N.D.
N.D.
stress
R2A with m-arsenite 0.8 mM
+0.2
-1.8
+0.2
N.D.
N.D.
stress
Erythromycin 12.5 ug/mL
-0.2
+0.0
-1.1
N.D.
N.D.
nitrogen source
D-Lysine (N)
-0.1
-1.1
+0.1
N.D.
N.D.
stress
Erythromycin 12.5 ug/mL
-0.3
-0.1
-0.8
N.D.
N.D.
stress
Streptomycin 200 ug/mL
-0.2
-0.2
-0.6
N.D.
N.D.
stress
R2A with Tetracycline 0.002 mM
+0.0
-0.5
-0.6
N.D.
N.D.
stress
Streptomycin 200 ug/mL
-0.2
-0.3
-0.6
N.D.
N.D.
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
-0.4
-0.3
N.D.
N.D.
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.6
-0.4
N.D.
N.D.
Atjh14
-0.3
+0.1
-0.5
N.D.
N.D.
stress
Timentin 6.25 ug/mL
-0.3
+0.5
-0.8
N.D.
N.D.
stress
Dodecyl Sulfate 0.2 mM
-0.4
+0.2
-0.4
N.D.
N.D.
stress
Timentin 6.25 ug/mL
-0.4
+0.4
-0.5
N.D.
N.D.
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.4
-0.3
N.D.
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.4
-0.3
-0.3
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.6
+0.4
N.D.
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
-0.3
-0.2
+0.4
N.D.
N.D.
nitrogen source
DL-2-Aminobutyric (N)
+0.5
-0.3
-0.3
N.D.
N.D.
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.3
-0.4
N.D.
N.D.
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.1
+0.6
N.D.
N.D.
stress
R2A with tungstate 375 mM
-0.1
+0.8
-0.1
N.D.
N.D.
carbon source
L-ascorbate (C)
+0.4
+0.4
+0.1
N.D.
N.D.
stress
R2A with tungstate 375 mM
+0.3
+0.4
+0.2
N.D.
N.D.
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.3
+0.8
N.D.
N.D.
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