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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu0632 and Atu0633 are separated by 6 nucleotides
Atu0633 and Atu0634 are separated by 191 nucleotides
Atu0634 and Atu0635 are separated by 44 nucleotides
Atu0635 and Atu0636 are separated by 96 nucleotides
Atu0632: Atu0632 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, at 619,823 to 620,722
Atu0632
Atu0633: Atu0633 - hypothetical protein, at 620,729 to 622,573
Atu0633
Atu0634: Atu0634 - octaprenyl-diphosphate synthase, at 622,765 to 623,781
Atu0634
Atu0635: Atu0635 - hypothetical protein, at 623,826 to 624,122
Atu0635
Atu0636: Atu0636 - hypothetical protein, at 624,219 to 624,929
Atu0636
Group
Condition
Atu0632
Atu0633
Atu0634
Atu0635
Atu0636
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
-0.9
-1.2
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
-0.2
-1.7
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
-1.0
-0.8
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
-0.9
-0.9
carbon source
m-Inositol (C)
N.D.
N.D.
N.D.
-0.3
-1.4
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
-0.4
-1.3
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
-0.5
-1.0
carbon source
D-Saccharic potassium salt (C)
N.D.
N.D.
N.D.
-0.4
-1.1
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
-0.6
-0.9
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
-0.8
-0.6
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
-0.8
-0.7
carbon source
D-Galacturonic Acid (C)
N.D.
N.D.
N.D.
-0.3
-1.2
carbon source
m-Inositol (C)
N.D.
N.D.
N.D.
-0.1
-1.4
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
-0.5
-0.8
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
-0.4
-1.0
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
N.D.
N.D.
N.D.
-0.4
-0.9
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
-0.0
-1.2
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
-0.4
-0.8
stress
R2A with hypochlorite 6.25 mM
N.D.
N.D.
N.D.
-0.5
-0.7
carbon source
L-Alanine (C)
N.D.
N.D.
N.D.
+0.0
-1.2
stress
R2A with Manganese (II) chloride tetrahydrate 5 mM
N.D.
N.D.
N.D.
+0.1
-1.1
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
+0.1
-1.1
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
+0.2
-1.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
-0.9
+0.3
phage
AgroPhage_E10
N.D.
N.D.
N.D.
-0.6
+0.7
nitrogen source
D-Lysine (N)
N.D.
N.D.
N.D.
+0.2
+1.0
stress
Dodecyl Sulfate 0.2 mM
N.D.
N.D.
N.D.
+0.5
+1.4
nitrogen source
DL-2-Aminobutyric (N)
N.D.
N.D.
N.D.
+0.5
+1.5
stress
R2A with Vancomycin 0.009 mM
N.D.
N.D.
N.D.
+0.2
+2.3
stress
R2A with Vancomycin 0.009 mM
N.D.
N.D.
N.D.
+0.7
+2.8
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