Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0620 and Atu0621 are separated by 0 nucleotidesAtu0621 and Atu0622 are separated by 227 nucleotidesAtu0622 and Atu0623 are separated by 70 nucleotidesAtu0623 and Atu0624 are separated by 82 nucleotides Atu0620: Atu0620 - cell division protein, at 608,838 to 609,578 Atu0620 Atu0621: Atu0621 - MFS permease, at 609,579 to 610,976 Atu0621 Atu0622: Atu0622 - metallo-beta-lactamase superfamily protein, at 611,204 to 612,187 Atu0622 Atu0623: Atu0623 - hypothetical protein, at 612,258 to 612,416 Atu0623 Atu0624: Atu0624 - inosine-5`-monophosphate dehydrogenase, at 612,499 to 613,872 Atu0624
Group Condition Atu0620 Atu0621 Atu0622 Atu0623 Atu0624
phage AgroPhage_E10 N.D. -0.5 -0.6 N.D. N.D.
phage AgroPhage_C04 N.D. -0.4 -0.6 N.D. N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 -0.3 N.D. N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 -0.3 N.D. N.D.
Atjh14 N.D. -0.7 +0.2 N.D. N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 -0.3 N.D. N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -0.3 -0.3 N.D. N.D.
carbon source Glycerol (C) N.D. -0.2 -0.4 N.D. N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 -0.4 N.D. N.D.
carbon source methyl-alpha-D-xylopyranoside (C) N.D. +0.1 -0.4 N.D. N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 +0.3 N.D. N.D.
Atjh15 N.D. -0.4 +0.2 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +0.3 -0.2 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.4 -0.1 N.D. N.D.
nitrogen source DL-2-Aminobutyric (N) N.D. -0.3 +0.6 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +0.5 -0.1 N.D. N.D.
Atjh10 N.D. -0.1 +0.5 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 +0.5 N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. +0.1 +0.4 N.D. N.D.
stress R2A with Strontium chloride 750 mM N.D. +0.3 +0.3 N.D. N.D.
nophagecontrol No phage control N.D. +0.3 +0.2 N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. +0.1 +0.4 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.5 +0.1 N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. +0.2 +0.4 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.4 +0.2 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 +0.4 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 +0.8 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 +1.0 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 +0.6 N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.4 +0.7 N.D. N.D.
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