Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0609 and Atu0610 are separated by 81 nucleotidesAtu0610 and Atu0611 are separated by 11 nucleotidesAtu0611 and Atu0612 are separated by 4 nucleotidesAtu0612 and Atu0613 are separated by 307 nucleotides Atu0609: Atu0609 - ABC transporter, substrate binding protein (putrescine), at 596,390 to 597,487 Atu0609 Atu0610: Atu0610 - ABC transporter, nucleotide binding/ATPase protein, at 597,569 to 598,726 Atu0610 Atu0611: Atu0611 - ABC transporter, membrane spanning protein, at 598,738 to 599,646 Atu0611 Atu0612: Atu0612 - ABC transporter, membrane spanning protein, at 599,651 to 600,463 Atu0612 Atu0613: Atu0613 - ABC transporter, membrane spanning protein, at 600,771 to 602,351 Atu0613
Group Condition Atu0609 Atu0610 Atu0611 Atu0612 Atu0613
nitrogen source spermidine (N) -1.3 -1.3 -1.9 -0.8 +0.1
nitrogen source Putrescine (N) -1.3 -1.4 -1.5 -0.4 -0.1
nitrogen source spermidine (N) -1.2 -1.6 -1.2 -0.9 +0.1
carbon source L-ascorbate (C) -0.7 -1.0 -0.9 -0.9 -0.0
nitrogen source Putrescine (N) -1.1 -1.2 -1.0 -0.3 +0.1
carbon source DL-glyceraldehyde (C) -0.9 -0.8 -0.8 -0.8 +0.0
carbon source L-ascorbate (C) -0.7 -0.7 -1.0 -0.7 +0.0
carbon source DL-glyceraldehyde (C) -0.8 -0.8 -0.7 -0.8 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 -1.2 -0.4 -0.3
stress R2A with Tetracycline 0.002 mM -0.6 -0.7 -0.5 -0.4 -0.2
stress R2A with Tetracycline 0.002 mM -0.6 -0.4 -0.4 -0.4 -0.1
carbon source D-Sorbitol (C) -0.4 -0.2 -1.0 -0.2 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.4 -0.6 -0.6 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.4 -0.4 -0.6 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -0.5 -0.5 -0.4
nitrogen source DL-2-Aminobutyric (N) +0.2 -0.0 -0.7 -0.5 -0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 +0.6 -0.8 -0.1
phage AgroPhage_C10 -0.7 +0.3 -0.7 +0.1 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 -0.5 +0.4 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 -0.8 +0.3 +0.1
phage AgroPhage_E10 -0.1 +0.1 +0.6 -0.6 +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 +0.8 +0.6 -0.5
phage AgroPhage_D10 +0.1 +0.2 +0.9 -0.3 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 +0.7 +0.4 +0.0
carbon source D-Saccharic potassium salt (C) -0.0 -0.0 +0.4 +1.3 +0.0
carbon source methyl-alpha-D-xylopyranoside (C) +0.0 +0.1 +0.6 +1.0 +0.1
stress R2A with m-arsenite 0.8 mM +0.8 +0.5 +0.9 +0.5 -0.7
nitrogen source D-Lysine (N) +0.8 +0.8 +0.5 +0.8 +0.1
stress R2A with m-arsenite 0.8 mM +1.2 +0.9 +1.1 +0.9 -0.5
nitrogen source D-Lysine (N) +1.3 +1.3 +1.1 +1.4 +0.0
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