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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu0557 and Atu0558 are separated by 11 nucleotides
Atu0558 and Atu0559 are separated by 1 nucleotides
Atu0559 and Atu0560 are separated by 330 nucleotides
Atu0560 and Atu0561 are separated by 2 nucleotides
Atu0557: Atu0557 - flagellum-specific ATP synthase, at 542,613 to 544,034
Atu0557
Atu0558: Atu0558 - flagellar basal body rod protein, at 544,046 to 544,780
Atu0558
Atu0559: Atu0559 - hypothetical protein, at 544,782 to 545,417
Atu0559
Atu0560: Atu0560 - flagellar motor protein, at 545,748 to 546,620
Atu0560
Atu0561: Atu0561 - flagellar motor switch protein, at 546,623 to 547,582
Atu0561
Group
Condition
Atu0557
Atu0558
Atu0559
Atu0560
Atu0561
carbon source
D-(-)-lyxose (C)
+1.1
+1.0
+1.0
+0.8
+1.0
carbon source
D-Sorbitol (C)
+0.9
+0.9
+1.0
+1.0
+1.1
r2a_control
R2A control
+1.1
+1.2
+0.7
+1.1
+0.9
r2a_control
R2A control
+1.0
+1.0
+1.0
+1.0
+1.0
r2a_control
R2A control
+1.1
+0.9
+1.0
+1.1
+1.0
stress
R2A with Rifampicin 0.0007 mM
+1.1
+1.0
+0.9
+1.1
+1.1
r2a_control
R2A control
+1.1
+1.2
+0.8
+1.0
+1.2
stress
R2A with Cobalt chloride 0.02 mM
+1.1
+1.1
+0.9
+1.3
+1.0
stress
R2A with Cesium chloride 1.75 mM
+1.1
+1.1
+1.0
+1.1
+1.1
stress
R2A with silver chloride 5 mM
+1.1
+1.1
+0.9
+1.1
+1.3
stress
R2A with Gallium(III) chloride 0.02 mM
+1.2
+1.1
+1.0
+1.1
+1.1
stress
R2A with Oxytetracycline 0.0002 mM
+1.1
+1.0
+1.1
+1.2
+1.3
stress
R2A with mercury (II) chloride 0.002 mM
+1.2
+1.1
+1.1
+1.1
+1.2
r2a_control
R2A control
+1.3
+1.2
+1.0
+1.3
+1.2
carbon source
D-Galacturonic Acid (C)
+1.3
+1.4
+1.2
+1.2
+1.2
carbon source
D-Galacturonic Acid (C)
+1.3
+1.4
+1.2
+1.2
+1.1
phage
AgroPhage_B01
+1.5
+1.6
+1.2
+1.4
+1.6
stress
R2A with Cobalt chloride 0.02 mM
+1.5
+1.5
+1.4
+1.6
+1.7
phage
Phage 95.3 + bacteria
+1.6
+1.8
+1.7
+1.9
+1.7
phage
Phage 95.3 + bacteria
+1.8
+1.9
+1.7
+1.9
+1.8
phage
AgroPhage_H04
+2.0
+2.0
+1.5
+1.9
+1.8
phage
Phage 95.3 + bacteria
+1.8
+1.8
+1.8
+1.9
+1.8
phage
AgroPhage_B07
+1.9
+2.2
+1.6
+1.9
+1.9
phage
AgroPhage_H10
+2.0
+2.2
+1.5
+1.9
+1.9
phage
AgroPhage_F04
+5.8
+5.8
+4.5
+5.6
+5.6
phage
AgroPhage_D10
+6.2
+6.3
+4.9
+6.1
+6.2
phage
AgroPhage_D04
+6.4
+6.4
+5.1
+6.3
+6.3
phage
AgroPhage_F10
+6.7
+6.8
+5.4
+6.5
+6.5
phage
AgroPhage_E04
+7.0
+7.0
+5.5
+6.8
+6.9
phage
AgroPhage_E10
+7.7
+7.9
+6.3
+7.7
+7.7
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