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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu0556 and Atu0557 are separated by 163 nucleotides
Atu0557 and Atu0558 are separated by 11 nucleotides
Atu0558 and Atu0559 are separated by 1 nucleotides
Atu0559 and Atu0560 are separated by 330 nucleotides
Atu0556: Atu0556 - hypothetical protein, at 542,045 to 542,449
Atu0556
Atu0557: Atu0557 - flagellum-specific ATP synthase, at 542,613 to 544,034
Atu0557
Atu0558: Atu0558 - flagellar basal body rod protein, at 544,046 to 544,780
Atu0558
Atu0559: Atu0559 - hypothetical protein, at 544,782 to 545,417
Atu0559
Atu0560: Atu0560 - flagellar motor protein, at 545,748 to 546,620
Atu0560
Group
Condition
Atu0556
Atu0557
Atu0558
Atu0559
Atu0560
stress
R2A with Vancomycin 0.009 mM
-1.1
+0.8
+1.0
+0.7
+0.7
carbon source
D-(-)-lyxose (C)
-0.2
+1.1
+1.0
+1.0
+0.9
r2a_control
R2A control
-0.1
+1.1
+1.2
+0.7
+1.1
r2a_control
R2A control
-0.1
+1.1
+1.2
+0.8
+1.0
r2a_control
R2A control
+0.2
+1.0
+1.0
+1.0
+1.0
stress
R2A with silver chloride 5 mM
+0.0
+1.1
+1.1
+0.9
+1.1
stress
R2A with Rifampicin 0.0007 mM
+0.0
+1.1
+1.0
+0.9
+1.1
r2a_control
R2A control
+0.4
+0.9
+0.9
+1.0
+1.0
stress
R2A with Cesium chloride 1.75 mM
-0.0
+1.1
+1.1
+1.0
+1.1
stress
R2A with Cobalt chloride 0.02 mM
-0.0
+1.1
+1.1
+0.9
+1.3
stress
R2A with Oxytetracycline 0.0002 mM
+0.1
+1.1
+1.0
+1.1
+1.2
stress
R2A with mercury (II) chloride 0.002 mM
-0.0
+1.2
+1.1
+1.1
+1.1
stress
R2A with Gallium(III) chloride 0.02 mM
+0.1
+1.2
+1.1
+1.0
+1.1
r2a_control
R2A control
+0.1
+1.3
+1.2
+1.0
+1.3
phage
AgroPhage_B01
-0.6
+1.5
+1.6
+1.2
+1.4
carbon source
D-Galacturonic Acid (C)
+0.2
+1.3
+1.4
+1.2
+1.2
carbon source
D-Galacturonic Acid (C)
+0.4
+1.3
+1.4
+1.2
+1.2
phage
Phage 95.3 + bacteria
-1.0
+1.6
+1.8
+1.7
+1.9
stress
R2A with Cobalt chloride 0.02 mM
+0.4
+1.5
+1.5
+1.4
+1.6
phage
Phage 95.3 + bacteria
-0.3
+1.8
+1.9
+1.7
+1.9
phage
Phage 95.3 + bacteria
-0.5
+1.8
+1.8
+1.8
+1.9
phage
AgroPhage_B07
-0.3
+1.9
+2.2
+1.6
+1.9
phage
AgroPhage_H04
-0.2
+2.0
+2.0
+1.5
+1.9
phage
AgroPhage_H10
-0.2
+2.0
+2.2
+1.5
+1.9
phage
AgroPhage_E04
-6.3
+7.0
+7.0
+5.5
+6.8
phage
AgroPhage_F04
-1.3
+5.8
+5.8
+4.5
+5.6
phage
AgroPhage_D10
-2.2
+6.2
+6.3
+4.9
+6.1
phage
AgroPhage_F10
-3.1
+6.7
+6.8
+5.4
+6.5
phage
AgroPhage_D04
-1.1
+6.4
+6.4
+5.1
+6.3
phage
AgroPhage_E10
-5.1
+7.7
+7.9
+6.3
+7.7
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