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Cofit
Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu0549 and Atu0550 overlap by 4 nucleotides
Atu0550 and Atu0551 overlap by 4 nucleotides
Atu0551 and Atu0552 are separated by 20 nucleotides
Atu0552 and Atu0553 are separated by 18 nucleotides
Atu0549: Atu0549 - hypothetical protein, at 537,757 to 538,293
Atu0549
Atu0550: Atu0550 - flagellar P-ring protein precursor, at 538,290 to 539,411
Atu0550
Atu0551: Atu0551 - flagellar protein FLGA precursor, at 539,408 to 539,896
Atu0551
Atu0552: Atu0552 - flagellar basal-body rod protein, at 539,917 to 540,705
Atu0552
Atu0553: Atu0553 - flagellar hook-basal body complex protein, at 540,724 to 541,062
Atu0553
Group
Condition
Atu0549
Atu0550
Atu0551
Atu0552
Atu0553
stress
R2A with silver chloride 5 mM
+1.1
+1.2
+1.4
+1.0
+1.1
carbon source
D-Galacturonic Acid (C)
+1.1
+1.2
+1.2
+1.2
+1.2
carbon source
D-Galacturonic Acid (C)
+1.2
+1.2
+1.0
+1.2
+1.2
stress
R2A with mercury (II) chloride 0.002 mM
+1.2
+1.2
+1.3
+1.2
+1.1
stress
R2A with Oxytetracycline 0.0002 mM
+1.1
+1.3
+1.8
+1.2
+1.1
r2a_control
R2A control
+1.3
+1.3
+1.5
+1.2
+1.2
phage
AgroPhage_B01
+1.3
+1.5
+1.4
+1.4
+1.4
stress
R2A with Cobalt chloride 0.02 mM
+1.5
+1.6
+1.8
+1.7
+1.6
phage
Phage 95.3 + bacteria
+1.8
+1.7
+1.7
+1.7
+1.7
phage
Phage 95.3 + bacteria
+1.8
+1.8
+1.6
+1.8
+1.6
phage
Phage 95.3 + bacteria
+1.9
+1.7
+1.8
+1.8
+1.8
phage
AgroPhage_H04
+1.7
+1.7
+2.2
+1.7
+2.1
phage
AgroPhage_H10
+1.7
+1.8
+2.2
+1.7
+2.2
phage
AgroPhage_B07
+2.0
+1.8
+2.1
+1.8
+2.1
Atjh10
+3.7
+4.2
+4.7
+4.3
+4.3
Atjh2
+3.8
+4.3
+4.7
+4.4
+4.3
Atjh2
+4.3
+4.8
+5.1
+4.9
+4.8
Atjh2
+4.4
+4.9
+5.2
+5.0
+4.8
Atjh10
+4.3
+5.0
+5.5
+5.1
+4.9
Atjh10
+4.6
+5.2
+5.8
+5.3
+5.1
Atjh2
+4.8
+5.4
+5.6
+5.4
+5.2
Atjh15
+4.8
+5.4
+5.7
+5.5
+5.2
phage
AgroPhage_F04
+5.3
+5.5
+5.7
+5.4
+5.7
phage
AgroPhage_D10
+6.0
+6.0
+6.0
+6.0
+6.2
Atjh15
+5.5
+6.2
+6.5
+6.2
+6.0
phage
AgroPhage_D04
+5.9
+6.2
+6.3
+6.1
+6.3
phage
AgroPhage_F10
+6.3
+6.6
+6.8
+6.4
+6.8
phage
AgroPhage_E04
+6.7
+6.9
+6.9
+6.7
+6.9
Atjh14
+7.1
+7.6
+8.1
+7.7
+7.5
phage
AgroPhage_E10
+7.4
+7.6
+8.0
+7.5
+7.8
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