Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0505 and Atu0506 are separated by 156 nucleotidesAtu0506 and Atu0507 are separated by 9 nucleotidesAtu0507 and Atu0508 overlap by 4 nucleotidesAtu0508 and Atu0509 overlap by 4 nucleotides Atu0505: Atu0505 - tRNA-Phe, at 496,313 to 496,388 Atu0505 Atu0506: Atu0506 - hypothetical protein, at 496,545 to 497,132 Atu0506 Atu0507: Atu0507 - potassium efflux system protein, at 497,142 to 497,486 Atu0507 Atu0508: Atu0508 - PH Adaption potassium efflux system, at 497,483 to 497,764 Atu0508 Atu0509: Atu0509 - phaE protein, at 497,761 to 498,246 Atu0509
Group Condition Atu0505 Atu0506 Atu0507 Atu0508 Atu0509
stress R2A with Strontium chloride 750 mM N.D. -0.1 -1.2 -6.8 N.D.
stress R2A with Strontium chloride 750 mM N.D. +0.1 -1.6 -4.5 N.D.
stress R2A with rubidium chloride 600 mM N.D. -0.0 -1.7 -3.1 N.D.
stress R2A with rubidium chloride 600 mM N.D. -0.4 -1.1 -2.4 N.D.
stress Chloramphenicol 12.5 ug/mL N.D. -0.7 -1.2 -0.5 N.D.
lb LB N.D. +0.2 -1.0 -1.4 N.D.
lb LB N.D. +0.2 -0.9 -1.3 N.D.
stress R2A with Vancomycin 0.009 mM N.D. -0.0 -1.0 -0.9 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 -0.6 -0.9 N.D.
stress Chloramphenicol 12.5 ug/mL N.D. +0.3 -1.1 -1.0 N.D.
stress R2A with Tetracycline 0.002 mM N.D. -0.1 -1.1 -0.5 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.1 -0.7 -0.8 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.3 -0.6 -1.3 N.D.
stress Erythromycin 12.5 ug/mL N.D. -0.0 -0.4 -1.1 N.D.
carbon source acetate (C) N.D. +0.1 -0.6 -1.0 N.D.
carbon source D-Xylose (C) N.D. +0.1 -0.7 -0.8 N.D.
carbon source D-Mannose (C) N.D. +0.1 -0.6 -0.8 N.D.
phage AgroPhage_A07 N.D. +0.1 -0.3 -1.1 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.2 -0.8 -0.5 N.D.
phage AgroPhage_E04 N.D. -0.2 +0.3 -1.1 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.5 -0.5 -0.8 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. +0.4 -0.5 -0.7 N.D.
phage AgroPhage_F10 N.D. +0.2 +0.6 -1.3 N.D.
nophagecontrol No phage control N.D. +0.3 +0.2 -1.1 N.D.
phage AgroPhage_D04 N.D. +0.3 +0.6 -0.6 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.5 +0.6 -0.6 N.D.
stress R2A with molybdate 400 mM N.D. -0.2 +0.7 +0.4 N.D.
stress Streptomycin 200 ug/mL N.D. +0.1 +0.8 +0.6 N.D.
nitrogen source DL-2-Aminobutyric (N) N.D. +1.3 -0.3 +0.9 N.D.
stress R2A with Gentamicin 0.00125 mM N.D. +0.0 +0.9 +1.2 N.D.
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