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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu0496 and Atu8130 are separated by 157 nucleotides
Atu8130 and Atu0498 are separated by 32 nucleotides
Atu0498 and Atu0499 are separated by 264 nucleotides
Atu0499 and Atu0500 overlap by 71 nucleotides
Atu0496: Atu0496 - hypothetical protein, at 483,264 to 483,701
Atu0496
Atu8130: Atu8130 - hypothetical protein, at 483,859 to 484,650
Atu8130
Atu0498: Atu0498 - hypothetical protein, at 484,683 to 485,609
Atu0498
Atu0499: Atu0499 - hypothetical protein, at 485,874 to 489,620
Atu0499
Atu0500: Atu0500 - hypothetical protein, at 489,550 to 489,831
Atu0500
Group
Condition
Atu0496
Atu8130
Atu0498
Atu0499
Atu0500
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.5
-1.3
-1.4
-1.8
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
-0.8
-1.3
-2.2
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-1.2
-1.4
-1.8
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.8
-1.5
-2.0
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-1.4
-1.2
-1.7
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
-0.8
-1.6
-1.7
N.D.
lb control
LB control
-0.1
-0.9
-1.4
-1.2
N.D.
lb_maize
LB_Maize
-0.0
-0.8
-1.2
-1.2
N.D.
lb control
LB control
-0.1
-0.8
-1.1
-1.3
N.D.
lb_wheat
LB_wheat
+0.1
-0.9
-1.3
-1.1
N.D.
lb_wheat
LB_wheat
-0.3
-0.9
-0.9
-1.0
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
-0.8
-0.8
-1.8
N.D.
lb control
LB control
-0.2
-0.9
-0.9
-1.1
N.D.
lb_wheat
LB_wheat
-0.2
-0.8
-1.1
-1.1
N.D.
lb control
LB control
+0.1
-1.0
-0.8
-1.4
N.D.
lb_maize
LB_Maize
-0.1
-0.9
-0.8
-1.2
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
-0.9
-0.4
-1.4
N.D.
lb_maize
LB_Maize
+0.0
-1.1
-0.9
-0.9
N.D.
lb_wheat
LB_wheat
+0.1
-0.9
-0.9
-1.2
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.8
-0.8
-1.4
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
-0.8
-0.9
-1.1
N.D.
stress
R2A with m-arsenite 0.8 mM
-0.0
-1.4
-1.5
+0.0
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.4
-0.9
-1.4
N.D.
lb_maize
LB_Maize
+0.2
-0.8
-0.8
-1.2
N.D.
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.4
-0.4
-0.7
-1.8
N.D.
stress
R2A with Vancomycin 0.009 mM
-0.3
-1.7
-1.9
+1.9
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.6
-0.3
-0.8
-1.5
N.D.
stress
R2A with Vancomycin 0.009 mM
+0.2
-1.4
-1.3
+1.2
N.D.
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075
+0.9
+0.1
-0.1
-1.7
N.D.
nitrogen source
DL-2-Aminobutyric (N)
+0.2
+2.5
+1.8
+2.1
N.D.
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