Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0492 and Atu0493 are separated by 107 nucleotidesAtu0493 and Atu0494 are separated by 259 nucleotidesAtu0494 and Atu0495 are separated by 34 nucleotidesAtu0495 and Atu0496 are separated by 22 nucleotides Atu0492: Atu0492 - hypothetical protein, at 478,768 to 479,229 Atu0492 Atu0493: Atu0493 - hypothetical protein, at 479,337 to 479,840 Atu0493 Atu0494: Atu0494 - large atp-dependant helicase-related protein, at 480,100 to 482,478 Atu0494 Atu0495: Atu0495 - hypothetical protein, at 482,513 to 483,241 Atu0495 Atu0496: Atu0496 - hypothetical protein, at 483,264 to 483,701 Atu0496
Group Condition Atu0492 Atu0493 Atu0494 Atu0495 Atu0496
stress R2A with Cisplatin 0.0016 mM -0.2 +0.1 -3.6 -3.9 -0.3
stress R2A with Cisplatin 0.0016 mM +0.1 +0.1 -3.8 -3.2 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.1 -0.2 -0.8 +0.0
no phage P2L5 +0.1 +0.0 -0.1 -0.5 -0.8
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 -0.0 -0.7 -0.4
stress R2A with Cobalt chloride 0.02 mM -0.3 -0.2 +0.2 -0.3 -0.7
phage AgroPhage_B01 +0.3 -0.6 -0.2 -0.5 +0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 -0.0 +0.2 -1.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.2 +0.0 +0.2 -1.2
stress R2A with Tetracycline 0.002 mM +0.3 -0.5 +0.1 -0.3 -0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.1 +0.0 +0.0 -1.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.2 -0.9 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.2 -0.7 -0.5
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -0.4 -0.0 -0.0 +0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 +0.0 +0.3 -0.9
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 +0.6 -0.0 -0.8 -0.6
phage AgroPhage_C10 -0.0 -0.4 +0.4 -0.5 +0.5
nophagecontrol No phage control +0.4 +0.2 -0.0 +0.2 -0.7
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.4 +0.3 -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.2 +0.2 +0.8 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +1.0 +0.3 -0.1 -0.6
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 -0.0 +0.4 -0.8
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.0 +0.1 +0.3 +0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.4 +0.3 -0.1 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 -0.2 -0.1 +0.3 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.0 +0.0 -0.3 +0.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.1 -0.2 -0.2 +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 +0.2 -0.0 +0.7 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.2 +0.4 +0.3 +0.7
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.5 +0.0 +0.2 +1.1
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