Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu8082	Atu0447	Atu0448	Atu0449	Atu0450
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-3.0	+0.1	-0.5	-0.1	-0.1
phage	Phage 97.3 + bacteria	-2.2	+0.0	+0.2	+0.0	-1.3
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-1.7	-0.2	-0.2	-0.2	+0.2
phage	phage 100.3	+0.1	-0.0	+0.1	-0.1	-2.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.0	-0.9	-0.2	+0.1	+0.2
phage	phage 100.2	-0.3	+0.1	+0.3	-0.1	-1.8
phage	Phage 95.1 + bacteria	-1.0	+0.1	+0.1	+0.1	-1.1
lb_wheat	LB_wheat	-1.4	-0.2	+0.2	+0.2	-0.3
phage	AgroPhage_E04	-0.5	-0.8	-0.6	-0.1	+0.6
phage	phage 95.1	+0.7	-0.2	+0.3	+0.2	-2.2
carbon source	D-Saccharic potassium salt (C)	-1.5	-0.3	+0.5	+0.2	-0.2
phage	phage 99.1	+0.3	+0.3	+0.1	+0.2	-2.0
stress	Pyrogallol 0.5 mM	-1.3	-0.3	-0.1	-0.1	+0.8
phage	phage 100.3	-0.0	+0.5	+0.3	+0.1	-1.9
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.6	+0.4	-0.1	+0.1	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.7	-0.4	-0.9	-0.3	+0.1
phage	AgroPhage_D04	-1.4	+0.6	-0.1	+0.0	+0.3
phage	AgroPhage_C04	-1.7	-0.0	-0.5	+0.1	+1.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.3	-0.2	+0.6	+0.2	+0.2
phage	AgroPhage_D10	-1.4	+0.6	-0.0	+0.1	+0.5
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-1.0	+0.7	+0.3	+0.2	+0.2
stress	Acetovanillone 5 mM	-0.2	-0.3	-0.3	-0.2	+1.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9	-0.1	+0.6	+0.1	+0.8
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+1.6	-0.5	+0.0	-0.4	-0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+1.0	+0.1	+0.3	-0.6	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2	+0.9	+0.9	+0.0	+0.8
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	+1.5	+0.4	+0.2	+0.0
stress	Acetovanillone 5 mM	+0.4	+0.0	-0.1	-0.2	+1.7
stress	R2A with tungstate 375 mM	+0.3	-0.1	-0.6	-0.0	+2.4
phage	AgroPhage_E10	+1.1	+0.7	-0.2	+0.0	+0.5