Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0446 and Atu8082 are separated by 158 nucleotidesAtu8082 and Atu0447 are separated by 56 nucleotidesAtu0447 and Atu0448 overlap by 4 nucleotidesAtu0448 and Atu0449 overlap by 1 nucleotides Atu0446: Atu0446 - hypothetical protein, at 440,613 to 441,758 Atu0446 Atu8082: Atu8082 - hypothetical protein, at 441,917 to 442,468 Atu8082 Atu0447: Atu0447 - hypothetical protein, at 442,525 to 443,106 Atu0447 Atu0448: Atu0448 - hypothetical protein, at 443,103 to 443,396 Atu0448 Atu0449: Atu0449 - hypothetical protein, at 443,396 to 444,616 Atu0449
Group Condition Atu0446 Atu8082 Atu0447 Atu0448 Atu0449
Atjh15 -0.0 -1.4 -1.2 -0.7 -0.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -3.0 +0.1 -0.6 -0.1
Atjh15 +0.3 -2.8 +0.2 -0.6 -0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -1.7 -0.2 -0.2 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.0 -0.9 -0.2 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.5 -0.1 -0.6 -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.4 -1.7 +0.0 +0.2 -0.1
Atjh2 -0.2 -1.5 -0.3 -0.0 +0.3
phage AgroPhage_C04 +0.4 -1.7 -0.0 -0.5 +0.1
phage Phage 97.3 + bacteria +0.2 -2.2 +0.0 +0.2 +0.0
phage AgroPhage_D07 -0.6 -1.0 +0.1 -0.4 +0.3
lb_wheat LB_wheat -0.3 -1.4 -0.2 +0.2 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.7 -0.4 -0.9 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -1.6 +0.4 -0.1 +0.1
carbon source D-Saccharic potassium salt (C) +0.1 -1.5 -0.3 +0.5 +0.2
phage AgroPhage_D10 -0.3 -1.4 +0.6 -0.0 +0.1
phage AgroPhage_D04 -0.1 -1.4 +0.6 -0.1 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.8 -0.2 -1.0 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -1.3 -0.2 +0.6 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 +0.4 +0.5 -0.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 +1.3 -0.2 -0.5 -0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -1.0 +0.7 +0.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -1.2 +0.9 +0.9 +0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +1.6 -0.5 +0.0 -0.4
stress Chloramphenicol 12.5 ug/mL -0.4 +1.5 +0.3 -0.3 +0.1
stress R2A with Tetracycline 0.002 mM -0.5 +1.0 +0.1 +0.4 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +1.2 -0.2 -0.4 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +1.1 -0.2 +0.4 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +1.4 -0.3 -0.2 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.6 +1.5 +0.4 +0.2
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