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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu0430 and Atu0431 are separated by 72 nucleotides
Atu0431 and Atu0432 are separated by 234 nucleotides
Atu0432 and Atu0434 are separated by 195 nucleotides
Atu0434 and Atu0435 are separated by 56 nucleotides
Atu0430: Atu0430 - chaperonin (heat shock protein hsp33), at 426,439 to 427,428
Atu0430
Atu0431: Atu0431 - apaG protein, at 427,501 to 427,893
Atu0431
Atu0432: Atu0432 - O-succinylhomoserine sulfhydrylase, at 428,128 to 429,312
Atu0432
Atu0434: Atu0434 - 2'-deoxycytidine 5'-triphosphate deaminase, at 429,508 to 430,620
Atu0434
Atu0435: Atu0435 - tRNA-Gly, at 430,677 to 430,750
Atu0435
Group
Condition
Atu0430
Atu0431
Atu0432
Atu0434
Atu0435
carbon source
Xylitol (C)
-0.1
-0.1
-6.4
-3.8
+0.0
carbon source
Methyl alpha-D-glucopyranoside (C)
-0.0
-0.1
-6.1
-4.0
-0.0
carbon source
D-Quinic (C)
+0.1
+0.0
-7.4
-3.4
+0.4
carbon source
D-Glucose (C)
-0.1
-0.2
-4.2
-5.7
-0.0
carbon source
D-Mannose (C)
-0.2
-0.2
-7.3
-2.8
+0.4
carbon source
D-Raffinose (C)
-0.0
-0.3
-7.3
-3.0
+0.5
carbon source
methyl-beta-L-arabinopyranoside (C)
+0.0
-0.3
-6.5
-3.5
+0.1
carbon source
succinate (C)
-0.4
-0.0
-6.9
-2.8
+0.1
carbon source
succinate (C)
-0.2
-0.2
-6.3
-3.2
-0.0
carbon source
D-Glucuronic gamma lactone (C)
+0.2
+0.0
-7.0
-3.1
-0.0
carbon source
Methyl beta-D-glucopyranoside (C)
-0.3
+0.1
-5.9
-3.6
-0.1
carbon source
D-Mannitol (C)
-0.1
-0.2
-7.3
-2.2
-0.0
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
+0.0
-0.1
-7.4
-2.0
-0.3
carbon source
L-Arabinose (C)
-0.1
-0.5
-6.6
-2.4
-0.1
carbon source
Stachyose (C)
-0.1
-0.1
-6.8
-2.8
+0.1
carbon source
pyruvate (C)
+0.1
-0.1
-5.7
-3.8
-0.2
carbon source
Protocatechuic Acid (C)
+0.1
-0.2
-7.4
-2.0
-0.1
carbon source
NAG (C)
-0.2
+0.2
-8.0
-1.8
+0.1
carbon source
Betanin (C)
-0.1
-0.1
-6.6
-2.9
+0.1
carbon source
L-Arabinose (C)
+0.0
+0.0
-7.9
-1.6
+0.1
carbon source
Cellotetraose (C)
+0.0
-0.1
-7.5
-2.2
+0.4
carbon source
D-Sorbitol (C)
+0.3
-0.3
-4.8
-4.1
-0.5
carbon source
D-Glucose-6-Phosphate (C)
+0.1
+0.2
-7.1
-2.2
-0.3
carbon source
D-Galactose (C)
-0.0
+0.1
-7.0
-2.5
+0.2
carbon source
NAG (C)
-0.2
-0.2
-6.0
-3.0
+0.4
carbon source
D-Raffinose (C)
-0.0
+0.4
-7.7
-1.4
-0.2
carbon source
Ribitol (C)
+0.2
-0.0
-7.4
-2.1
+0.7
carbon source
D-Fructose (C)
+0.1
-0.1
-6.8
-2.2
+0.6
carbon source
D-Fructose (C)
+0.1
+0.1
-7.2
-1.9
+0.6
carbon source
D-Ribose (C)
+0.1
-0.1
-7.4
-1.4
+0.7
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