Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0427 and Atu0428 are separated by 30 nucleotidesAtu0428 and Atu0429 are separated by 56 nucleotidesAtu0429 and Atu0430 are separated by 236 nucleotidesAtu0430 and Atu0431 are separated by 72 nucleotides Atu0427: Atu0427 - hypothetical protein, at 423,750 to 423,998 Atu0427 Atu0428: Atu0428 - acetylornithine aminotransferase, at 424,029 to 425,228 Atu0428 Atu0429: Atu0429 - ornithine carbamoyltransferase, at 425,285 to 426,202 Atu0429 Atu0430: Atu0430 - chaperonin (heat shock protein hsp33), at 426,439 to 427,428 Atu0430 Atu0431: Atu0431 - apaG protein, at 427,501 to 427,893 Atu0431
Group Condition Atu0427 Atu0428 Atu0429 Atu0430 Atu0431
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 N.D. N.D. -0.7 -0.2
stress R2A with hypochlorite 6.25 mM -0.2 N.D. N.D. -1.1 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 N.D. N.D. -0.3 -0.5
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. N.D. -0.4 -0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. N.D. -1.3 -0.4
phage Phage 95.3 + bacteria -0.3 N.D. N.D. -0.7 -0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 N.D. N.D. -0.6 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. N.D. -0.6 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. N.D. -1.1 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. N.D. -0.9 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. N.D. -1.3 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. -1.2 -0.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 N.D. N.D. -1.0 +0.3
phage AgroPhage_B07 -1.1 N.D. N.D. -0.1 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. N.D. -1.1 +0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 N.D. N.D. -0.9 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 N.D. N.D. -0.5 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.9 N.D. N.D. -0.7 -0.1
stress Chloramphenicol 12.5 ug/mL -0.6 N.D. N.D. +0.4 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 N.D. N.D. -0.5 +1.2
stress Streptomycin 200 ug/mL +0.1 N.D. N.D. +1.1 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.8 N.D. N.D. -1.0 +0.0
phage phage 100.2 +0.9 N.D. N.D. -0.3 +0.3
stress Streptomycin 200 ug/mL +0.1 N.D. N.D. +1.1 +0.3
nitrogen source DL-2-Aminobutyric (N) -0.6 N.D. N.D. +1.8 +0.6
stress Erythromycin 12.5 ug/mL +0.5 N.D. N.D. +1.0 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.8 N.D. N.D. +0.1 +0.1
stress R2A with Vancomycin 0.009 mM +0.7 N.D. N.D. +2.4 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +2.3 N.D. N.D. +0.1 +1.0
stress R2A with Vancomycin 0.009 mM +0.9 N.D. N.D. +2.9 +0.0
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