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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu0422 and Atu0423 are separated by 14 nucleotides
Atu0423 and Atu0424 are separated by 96 nucleotides
Atu0424 and Atu0425 are separated by 32 nucleotides
Atu0425 and Atu0426 are separated by 336 nucleotides
Atu0422: Atu0422 - ABC transporter, membrane spanning protein, at 419,082 to 420,404
Atu0422
Atu0423: Atu0423 - ABC transporter, nucleotide binding/ATPase protein, at 420,419 to 421,234
Atu0423
Atu0424: Atu0424 - phosphate transport system regulatory protein, at 421,331 to 422,056
Atu0424
Atu0425: Atu0425 - two component response regulator, at 422,089 to 422,772
Atu0425
Atu0426: Atu0426 - hypothetical protein, at 423,109 to 423,690
Atu0426
Group
Condition
Atu0422
Atu0423
Atu0424
Atu0425
Atu0426
carbon source
D-Mannitol (C)
-6.2
N.D.
N.D.
N.D.
N.D.
lb
LB
-6.2
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-6.2
N.D.
N.D.
N.D.
N.D.
carbon source
Fumarate (C)
-6.1
N.D.
N.D.
N.D.
N.D.
carbon source
D-Mannose (C)
-6.0
N.D.
N.D.
N.D.
N.D.
carbon source
D-Mannose (C)
-6.0
N.D.
N.D.
N.D.
N.D.
carbon source
Protocatechuic Acid (C)
-5.9
N.D.
N.D.
N.D.
N.D.
carbon source
Myristic (C)
-5.9
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
-5.0
N.D.
N.D.
N.D.
N.D.
lb
LB
-4.9
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
-4.9
N.D.
N.D.
N.D.
N.D.
carbon source
D-Ribose (C)
-4.6
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-4.4
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.3
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.3
N.D.
N.D.
N.D.
N.D.
lb_wheat
LB_wheat
-4.3
N.D.
N.D.
N.D.
N.D.
lb control
LB control
-4.3
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.3
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.2
N.D.
N.D.
N.D.
N.D.
lb_maize
LB_Maize
-4.2
N.D.
N.D.
N.D.
N.D.
lb_wheat
LB_wheat
-4.2
N.D.
N.D.
N.D.
N.D.
lb control
LB control
-4.1
N.D.
N.D.
N.D.
N.D.
lb control
LB control
-4.1
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.1
N.D.
N.D.
N.D.
N.D.
lb_maize
LB_Maize
-4.1
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.1
N.D.
N.D.
N.D.
N.D.
carbon source
D-Mannitol (C)
-4.1
N.D.
N.D.
N.D.
N.D.
lb_wheat
LB_wheat
-4.1
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-4.1
N.D.
N.D.
N.D.
N.D.
carbon source
succinate (C)
-4.0
N.D.
N.D.
N.D.
N.D.
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