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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu0421 and Atu0422 overlap by 4 nucleotides
Atu0422 and Atu0423 are separated by 14 nucleotides
Atu0423 and Atu0424 are separated by 96 nucleotides
Atu0424 and Atu0425 are separated by 32 nucleotides
Atu0421: Atu0421 - ABC transporter, membrane spanning protein, at 417,601 to 419,085
Atu0421
Atu0422: Atu0422 - ABC transporter, membrane spanning protein, at 419,082 to 420,404
Atu0422
Atu0423: Atu0423 - ABC transporter, nucleotide binding/ATPase protein, at 420,419 to 421,234
Atu0423
Atu0424: Atu0424 - phosphate transport system regulatory protein, at 421,331 to 422,056
Atu0424
Atu0425: Atu0425 - two component response regulator, at 422,089 to 422,772
Atu0425
Group
Condition
Atu0421
Atu0422
Atu0423
Atu0424
Atu0425
carbon source
Protocatechuic Acid (C)
-5.9
-5.9
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
-6.0
-5.0
N.D.
N.D.
N.D.
carbon source
D-Mannitol (C)
-4.7
-6.2
N.D.
N.D.
N.D.
carbon source
Fumarate (C)
-4.5
-6.1
N.D.
N.D.
N.D.
carbon source
D-Mannose (C)
-4.5
-6.0
N.D.
N.D.
N.D.
carbon source
D-Mannose (C)
-4.4
-6.0
N.D.
N.D.
N.D.
carbon source
Myristic (C)
-4.4
-5.9
N.D.
N.D.
N.D.
lb
LB
-3.6
-6.2
N.D.
N.D.
N.D.
lb_wheat
LB_wheat
-4.9
-4.3
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.9
-4.3
N.D.
N.D.
N.D.
carbon source
acetate (C)
-4.8
-4.4
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.9
-4.2
N.D.
N.D.
N.D.
lb control
LB control
-4.9
-4.3
N.D.
N.D.
N.D.
carbon source
D-Xylose (C)
-6.1
-2.9
N.D.
N.D.
N.D.
lb_wheat
LB_wheat
-4.8
-4.2
N.D.
N.D.
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.9
-4.1
N.D.
N.D.
N.D.
lb_maize
LB_Maize
-4.8
-4.2
N.D.
N.D.
N.D.
lb control
LB control
-4.8
-4.1
N.D.
N.D.
N.D.
lb control
LB control
-4.8
-4.1
N.D.
N.D.
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.8
-4.1
N.D.
N.D.
N.D.
lb_maize
LB_Maize
-4.8
-4.1
N.D.
N.D.
N.D.
lb_wheat
LB_wheat
-4.8
-4.1
N.D.
N.D.
N.D.
carbon source
D-Mannitol (C)
-4.7
-4.1
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.8
-4.0
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.8
-3.9
N.D.
N.D.
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.7
-3.9
N.D.
N.D.
N.D.
carbon source
succinate (C)
-4.9
-3.7
N.D.
N.D.
N.D.
carbon source
acetate (C)
-2.5
-6.2
N.D.
N.D.
N.D.
lb control
LB control
-4.9
-3.4
N.D.
N.D.
N.D.
lb_maize
LB_Maize
-4.9
-3.4
N.D.
N.D.
N.D.
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