Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0403 and Atu0404 are separated by 55 nucleotidesAtu0404 and Atu0405 are separated by 130 nucleotidesAtu0405 and Atu0406 are separated by 357 nucleotidesAtu0406 and Atu0407 are separated by 153 nucleotides Atu0403: Atu0403 - hypothetical protein, at 397,648 to 398,376 Atu0403 Atu0404: Atu0404 - glucose-6-phosphate isomerase, at 398,432 to 400,057 Atu0404 Atu0405: Atu0405 - long-chain-fatty-acid-CoA-ligase, at 400,188 to 401,900 Atu0405 Atu0406: Atu0406 - ABC transporter, nucleotide binding/ATPase protein, at 402,258 to 403,307 Atu0406 Atu0407: Atu0407 - ABC transporter, substrate binding protein (iron), at 403,461 to 404,477 Atu0407
Group Condition Atu0403 Atu0404 Atu0405 Atu0406 Atu0407
carbon source NAG (C) +0.2 N.D. -4.0 -0.2 -0.0
carbon source NAG (C) +0.2 N.D. -3.9 -0.1 -0.1
carbon source Ethyl benzoate (C) +0.0 N.D. -2.6 -0.3 +0.0
carbon source L-Galactose (C) -0.1 N.D. -2.4 -0.2 -0.1
carbon source methyl-beta-D-xylopyranoside (C) -0.1 N.D. -2.5 -0.3 +0.1
carbon source L-Sorbose (C) +0.1 N.D. -1.9 -0.6 -0.2
stress R2A with m-arsenite 0.8 mM -0.0 N.D. -1.9 -0.7 +0.0
carbon source L-Sorbose (C) -0.0 N.D. -1.7 -0.6 -0.1
carbon source Ethyl benzoate (C) +0.1 N.D. -2.4 -0.0 -0.1
carbon source L-Galactose (C) +0.0 N.D. -2.4 +0.1 -0.0
carbon source methyl-beta-D-xylopyranoside (C) +0.1 N.D. -2.4 -0.1 +0.1
carbon source Xylobiose (C) +0.2 N.D. -2.4 -0.0 +0.0
carbon source D-Quinic (C) +0.0 N.D. -1.8 -0.2 -0.1
carbon source D-Quinic (C) +0.1 N.D. -1.8 -0.3 +0.0
carbon source Ribitol (C) +0.0 N.D. -1.5 -0.3 -0.1
carbon source m-Inositol (C) +0.0 N.D. -1.7 -0.3 +0.1
stress R2A with m-arsenite 0.8 mM -0.1 N.D. -1.3 -0.4 -0.1
carbon source Melibiose (C) -0.1 N.D. -1.6 -0.1 +0.0
carbon source m-Inositol (C) +0.2 N.D. -1.7 -0.2 -0.0
carbon source Xylobiose (C) +0.1 N.D. -1.7 +0.0 -0.2
carbon source Melibiose (C) -0.1 N.D. -1.7 +0.1 -0.0
carbon source Cellopentaose (C) +0.0 N.D. -1.2 -0.5 -0.0
stress R2A with Manganese (II) chloride tetrahydrate 5 mM -0.1 N.D. -0.1 -1.3 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. -0.7 -1.0 -0.2
carbon source Cellohexaose (C) -0.2 N.D. -1.3 -0.3 +0.0
stress R2A with Vancomycin 0.009 mM +0.3 N.D. -2.0 +0.0 +0.3
carbon source Cellohexaose (C) +0.2 N.D. -1.3 -0.2 +0.1
carbon source Myristic (C) +0.2 N.D. -1.5 +0.0 +0.1
stress R2A with Vancomycin 0.009 mM +0.3 N.D. -1.7 +0.5 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. -0.7 +0.4 -0.1
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