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Cofit
Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu0398 and Atu0399 are separated by 112 nucleotides
Atu0399 and Atu0400 are separated by 151 nucleotides
Atu0400 and Atu0401 are separated by 99 nucleotides
Atu0401 and Atu0402 are separated by 124 nucleotides
Atu0398: Atu0398 - hypothetical protein, at 392,498 to 393,535
Atu0398
Atu0399: Atu0399 - dihydroorotase, at 393,648 to 394,685
Atu0399
Atu0400: Atu0400 - orotate phosphoribosyltransferase, at 394,837 to 395,535
Atu0400
Atu0401: Atu0401 - fructokinase, at 395,635 to 396,561
Atu0401
Atu0402: Atu0402 - hypothetical protein, at 396,686 to 397,651
Atu0402
Group
Condition
Atu0398
Atu0399
Atu0400
Atu0401
Atu0402
carbon source
D-Mannitol (C)
+0.0
-5.2
-6.6
-9.0
+0.1
carbon source
D-Fructose (C)
+0.2
-6.2
-5.5
-9.1
+0.0
carbon source
L-Sorbose (C)
+0.2
-6.0
-6.7
-7.6
+0.1
carbon source
D-Mannose (C)
-0.2
-5.4
-5.6
-8.8
+0.2
carbon source
D-Fructose (C)
-0.1
-5.9
-6.6
-6.4
-0.0
carbon source
L-Sorbose (C)
+0.0
-5.8
-5.9
-5.8
-0.3
carbon source
D-Mannitol (C)
+0.1
-5.2
-6.0
-6.5
+0.1
carbon source
D-Mannose (C)
-0.1
-5.2
-6.3
-6.1
+0.2
carbon source
Sucrose (C)
+0.0
-6.2
-7.3
-3.3
+0.2
carbon source
D-(+)-Turanose (C)
-0.0
-6.3
-7.0
-2.6
-0.0
carbon source
Dihydroxyacetone (C)
-0.0
-5.9
-6.6
-2.8
+0.0
carbon source
D-Glucosamine Hydrochloride (C)
+0.0
-5.8
-6.4
-2.7
-0.1
carbon source
D-(+)-Turanose (C)
+0.1
-5.3
-7.0
-2.7
-0.1
carbon source
D-Raffinose (C)
+0.1
-5.9
-5.8
-3.1
-0.0
carbon source
NAG (C)
-0.0
-5.8
-6.8
-2.0
+0.0
carbon source
D-Leucrose (C)
+0.1
-4.9
-5.7
-4.0
+0.1
carbon source
palatinose (C)
-0.0
-4.7
-6.9
-2.7
-0.1
carbon source
Lactulose (C)
-0.0
-4.7
-5.0
-4.5
-0.0
carbon source
D-Leucrose (C)
+0.1
-5.2
-5.5
-3.6
+0.0
carbon source
Betanin (C)
-0.1
-6.1
-6.4
-1.5
-0.0
carbon source
Cellotetraose (C)
-0.0
-6.4
-7.1
-0.5
-0.1
carbon source
L-Fucose (C)
+0.1
-6.0
-6.9
-1.0
-0.1
carbon source
Lactulose (C)
+0.1
-4.5
-5.5
-4.1
+0.1
carbon source
Stachyose (C)
-0.0
-5.6
-6.3
-1.6
-0.2
carbon source
m-Inositol (C)
+0.1
-6.3
-7.0
-0.5
+0.1
carbon source
Betanin (C)
+0.1
-6.0
-5.8
-2.0
+0.1
carbon source
D-Raffinose (C)
+0.2
-4.8
-6.1
-2.7
+0.2
carbon source
D-Glucuronic gamma lactone (C)
+0.1
-6.4
-7.1
+0.2
+0.0
carbon source
Xylitol (C)
+0.1
-4.6
-5.2
+8.0
-0.1
carbon source
Xylitol (C)
+0.1
-4.4
-4.6
+7.6
-0.2
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