Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0388 and Atu8009 are separated by 78 nucleotidesAtu8009 and Atu0389 are separated by 37 nucleotidesAtu0389 and Atu0390 are separated by 180 nucleotidesAtu0390 and Atu0391 are separated by 331 nucleotides Atu0388: Atu0388 - two component sensor kinase, at 381,014 to 382,489 Atu0388 Atu8009: Atu8009 - hypothetical protein, at 382,568 to 382,669 Atu8009 Atu0389: Atu0389 - tRNA-Arg, at 382,707 to 382,783 Atu0389 Atu0390: Atu0390 - ubiquinone/menaquinone biosynthesis methyltransferase, at 382,964 to 383,776 Atu0390 Atu0391: Atu0391 - ABC transporter, nucleotide binding/ATPase protein, at 384,108 to 385,139 Atu0391
Group Condition Atu0388 Atu8009 Atu0389 Atu0390 Atu0391
stress Dodecyl Sulfate 0.2 mM -3.9 N.D. N.D. -0.1 +0.0
stress Dodecyl Sulfate 0.2 mM -2.9 N.D. N.D. +0.1 +0.1
stress R2A with Strontium chloride 750 mM -2.4 N.D. N.D. -0.1 +0.0
stress R2A with Chloride 700 mM -2.3 N.D. N.D. +0.4 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 N.D. N.D. -0.7 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.5 N.D. N.D. -0.5 +0.1
no phage P2L5 -1.4 N.D. N.D. -0.4 -0.0
stress methyl jasmonate 5 mM -1.9 N.D. N.D. +0.0 +0.1
carbon source Protocatechuic Acid (C) -1.7 N.D. N.D. -0.0 -0.0
carbon source Protocatechuic Acid (C) -1.9 N.D. N.D. +0.2 -0.1
lb LB -1.8 N.D. N.D. +0.0 +0.2
carbon source acetate (C) -1.5 N.D. N.D. +0.0 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 N.D. N.D. -0.5 -0.1
carbon source acetate (C) -1.4 N.D. N.D. +0.0 -0.1
stress R2A with sodium iodate 30 mM -1.5 N.D. N.D. +0.2 -0.2
carbon source D-Ribose (C) -1.5 N.D. N.D. +0.0 +0.0
lb LB -1.8 N.D. N.D. +0.2 +0.1
carbon source D-Mannitol (C) -1.6 N.D. N.D. +0.1 -0.0
carbon source L-Alanine (C) -1.5 N.D. N.D. +0.2 -0.1
carbon source D-Mannose (C) -1.6 N.D. N.D. +0.1 +0.1
carbon source succinate (C) -1.6 N.D. N.D. +0.3 -0.0
carbon source D-Ribose (C) -1.4 N.D. N.D. +0.1 -0.1
carbon source L-Arabinose (C) -1.4 N.D. N.D. +0.2 -0.1
carbon source D-Mannose (C) -1.5 N.D. N.D. +0.2 -0.0
carbon source D-Xylose (C) -1.5 N.D. N.D. +0.2 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 N.D. N.D. -0.3 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 N.D. N.D. +0.5 -0.3
stress R2A with tungstate 375 mM +1.4 N.D. N.D. -0.1 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. +0.7 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 N.D. N.D. +0.4 +0.6
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