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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu0354 and Atu0355 are separated by 30 nucleotides
Atu0355 and Atu0356 are separated by 186 nucleotides
Atu0356 and Atu0357 are separated by 40 nucleotides
Atu0357 and Atu0358 are separated by 10 nucleotides
Atu0354: Atu0354 - ferric uptake regulator, at 348,239 to 348,667
Atu0354
Atu0355: Atu0355 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 348,698 to 349,492
Atu0355
Atu0356: Atu0356 - miaB protein, at 349,679 to 351,046
Atu0356
Atu0357: Atu0357 - phosphate starvation inducible protein, at 351,087 to 352,142
Atu0357
Atu0358: Atu0358 - hypothetical protein, at 352,153 to 352,659
Atu0358
Group
Condition
Atu0354
Atu0355
Atu0356
Atu0357
Atu0358
stress
R2A with Polymyxin B sulfate 0.00075 mM
-1.8
-2.3
-0.3
-0.7
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
-3.3
-0.2
-0.1
-1.1
N.D.
stress
D(+)-Carvone 5 mM
-2.1
-2.1
+0.1
-0.0
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 5 mM
-4.0
-0.0
+0.0
-0.2
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-2.1
-0.2
-0.2
-1.6
N.D.
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.3
-0.2
-0.5
-1.2
N.D.
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.4
-0.3
-0.2
-1.3
N.D.
stress
R2A with m-arsenite 0.8 mM
-3.3
-0.6
-0.5
+0.4
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.9
-0.2
-0.1
-1.8
N.D.
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.9
+0.2
-0.2
-2.1
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-2.1
-0.7
-0.0
-1.1
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.8
+0.1
-0.2
-0.9
N.D.
stress
R2A with m-arsenite 0.8 mM
-3.0
-0.8
-0.4
+0.5
N.D.
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.2
-0.4
-0.2
-0.7
N.D.
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075
-2.7
-0.3
-0.1
-0.3
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 5 mM
-3.4
+0.0
+0.0
-0.1
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.9
-0.0
-0.1
-2.4
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.6
-0.2
-0.2
-1.3
N.D.
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-1.6
-0.6
-0.4
-0.7
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-1.8
-0.3
-0.5
-0.7
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
-2.5
-0.3
-0.0
-0.4
N.D.
in planta
Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-2.7
-0.2
+0.0
-0.3
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.6
-0.3
+0.1
-0.3
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-2.1
+0.2
-0.1
-1.1
N.D.
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.5
+0.1
-0.0
-0.6
N.D.
carbon source
Ethyl benzoate (C)
-1.8
-0.7
+0.1
-0.5
N.D.
in planta
Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-2.8
+0.0
-0.2
+0.1
N.D.
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.3
+0.2
+0.2
-0.7
N.D.
stress
R2A with Vancomycin 0.009 mM
-0.4
-0.5
-1.1
+2.6
N.D.
stress
R2A with Vancomycin 0.009 mM
-0.1
-0.9
-1.2
+3.0
N.D.
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