Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0346 and Atu0347 are separated by 7 nucleotidesAtu0347 and Atu0348 overlap by 1 nucleotidesAtu0348 and Atu0349 are separated by 103 nucleotidesAtu0349 and Atu8118 are separated by 114 nucleotides Atu0346: Atu0346 - uridylyltransferase/uridylyl-removing enzyme UTase, at 339,637 to 342,465 Atu0346 Atu0347: Atu0347 - virulence factor MviN, at 342,473 to 344,062 Atu0347 Atu0348: Atu0348 - hypothetical protein, at 344,062 to 344,466 Atu0348 Atu0349: Atu0349 - tryptophan-tRNA ligase, at 344,570 to 345,634 Atu0349 Atu8118: Atu8118 - putative universal stress protein, at 345,749 to 346,240 Atu8118
Group Condition Atu0346 Atu0347 Atu0348 Atu0349 Atu8118
nitrogen source L-Proline (N) -5.2 N.D. -0.1 N.D. -0.2
nitrogen source nitrate (N) -5.0 N.D. -0.1 N.D. +0.1
nitrogen source nitrate (N) -5.1 N.D. -0.0 N.D. +0.2
nitrogen source L-Glutamic (N) -4.4 N.D. -0.2 N.D. -0.3
carbon source Mannobiose (C) -4.7 N.D. -0.0 N.D. -0.1
nitrogen source L-Proline (N) -4.4 N.D. -0.1 N.D. -0.1
nitrogen source 3-aminobutyric (N) -4.3 N.D. -0.0 N.D. -0.1
carbon source Beta-Lactose (C) -4.7 N.D. +0.1 N.D. +0.4
stress R2A with chromate 0.1 mM -3.7 N.D. -0.1 N.D. -0.4
nitrogen source L-Cysteine (N) -3.6 N.D. -0.3 N.D. -0.2
carbon source Lactitol (C) -4.0 N.D. +0.0 N.D. -0.1
carbon source L-Fucose (C) -3.8 N.D. +0.2 N.D. -0.4
carbon source L-Xylose (C) -3.9 N.D. -0.1 N.D. +0.0
carbon source L-Fucose (C) -3.7 N.D. +0.0 N.D. -0.3
carbon source alpha-Lactose (C) -4.2 N.D. -0.1 N.D. +0.4
carbon source Beta-Lactose (C) -4.2 N.D. -0.1 N.D. +0.5
nitrogen source Choline chloride (N) -3.1 N.D. +0.1 N.D. -0.8
nitrogen source Choline chloride (N) -2.5 N.D. -0.0 N.D. -1.3
carbon source D-Sorbitol (C) -3.4 N.D. +0.5 N.D. -0.9
nitrogen source Betaine (N) -3.4 N.D. -0.2 N.D. -0.2
nitrogen source 3-aminobutyric (N) -3.4 N.D. -0.2 N.D. -0.1
No phage control -4.1 N.D. -0.2 N.D. +0.6
Atjh10 -3.7 N.D. +0.1 N.D. -0.1
carbon source alpha-Lactose (C) -3.8 N.D. -0.0 N.D. +0.1
carbon source Lactulose (C) -3.7 N.D. +0.0 N.D. -0.1
nitrogen source NAG (N) -3.6 N.D. -0.1 N.D. +0.1
carbon source Lactulose (C) -3.3 N.D. +0.2 N.D. -0.2
Atjh2 -3.5 N.D. +0.2 N.D. +0.3
stress R2A with m-arsenite 0.8 mM +3.0 N.D. +0.3 N.D. -0.6
stress R2A with tungstate 375 mM -0.0 N.D. -0.1 N.D. +3.8
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