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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu0345 and Atu0346 are separated by 96 nucleotides
Atu0346 and Atu0347 are separated by 7 nucleotides
Atu0347 and Atu0348 overlap by 1 nucleotides
Atu0348 and Atu0349 are separated by 103 nucleotides
Atu0345: Atu0345 - DNA mismatch repair protein, MutS family, at 336,889 to 339,540
Atu0345
Atu0346: Atu0346 - uridylyltransferase/uridylyl-removing enzyme UTase, at 339,637 to 342,465
Atu0346
Atu0347: Atu0347 - virulence factor MviN, at 342,473 to 344,062
Atu0347
Atu0348: Atu0348 - hypothetical protein, at 344,062 to 344,466
Atu0348
Atu0349: Atu0349 - tryptophan-tRNA ligase, at 344,570 to 345,634
Atu0349
Group
Condition
Atu0345
Atu0346
Atu0347
Atu0348
Atu0349
nitrogen source
L-Proline (N)
-0.0
-5.2
N.D.
-0.1
N.D.
nitrogen source
nitrate (N)
-0.2
-5.0
N.D.
-0.1
N.D.
nitrogen source
nitrate (N)
-0.0
-5.1
N.D.
-0.0
N.D.
carbon source
Mannobiose (C)
-0.0
-4.7
N.D.
-0.0
N.D.
nitrogen source
L-Glutamic (N)
-0.1
-4.4
N.D.
-0.2
N.D.
carbon source
Beta-Lactose (C)
-0.0
-4.7
N.D.
+0.1
N.D.
nitrogen source
L-Proline (N)
-0.1
-4.4
N.D.
-0.1
N.D.
carbon source
alpha-Lactose (C)
-0.1
-4.3
N.D.
-0.1
N.D.
nitrogen source
3-aminobutyric (N)
+0.0
-4.3
N.D.
-0.0
N.D.
carbon source
Beta-Lactose (C)
+0.0
-4.2
N.D.
-0.1
N.D.
carbon source
L-Xylose (C)
-0.0
-3.9
N.D.
-0.1
N.D.
nitrogen source
L-Cysteine (N)
-0.1
-3.6
N.D.
-0.3
N.D.
carbon source
Mannobiose (C)
-0.3
-3.5
N.D.
-0.2
N.D.
carbon source
Lactitol (C)
+0.0
-4.0
N.D.
+0.0
N.D.
carbon source
alpha-Lactose (C)
-0.1
-3.8
N.D.
-0.0
N.D.
stress
R2A with chromate 0.1 mM
+0.0
-3.7
N.D.
-0.1
N.D.
nitrogen source
Betaine (N)
-0.2
-3.4
N.D.
-0.2
N.D.
nitrogen source
NAG (N)
-0.1
-3.6
N.D.
-0.1
N.D.
carbon source
Lactulose (C)
-0.1
-3.7
N.D.
+0.0
N.D.
carbon source
L-Fucose (C)
-0.1
-3.8
N.D.
+0.2
N.D.
nitrogen source
L-Glutamic (N)
-0.2
-3.4
N.D.
-0.1
N.D.
nitrogen source
3-aminobutyric (N)
-0.0
-3.4
N.D.
-0.2
N.D.
carbon source
L-Fucose (C)
+0.1
-3.7
N.D.
+0.0
N.D.
nitrogen source
D-Alanine (N)
-0.2
-3.3
N.D.
-0.0
N.D.
nitrogen source
L-Threonine (N)
-0.2
-3.3
N.D.
-0.0
N.D.
nitrogen source
L-Aspartic Acid (N)
-0.2
-3.2
N.D.
+0.1
N.D.
carbon source
Maltitol (C)
+0.0
-3.4
N.D.
+0.1
N.D.
carbon source
Lactulose (C)
-0.1
-3.3
N.D.
+0.2
N.D.
nitrogen source
L-Pipecolic Acid (N)
-0.3
-3.0
N.D.
+0.2
N.D.
carbon source
D-Sorbitol (C)
+0.1
-3.4
N.D.
+0.5
N.D.
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