Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1003 experiments or choose conditions or try the comparative fitness browser

500 ntAtu0329 and Atu0330 are separated by 81 nucleotidesAtu0330 and Atu0331 are separated by 82 nucleotidesAtu0331 and Atu0332 are separated by 233 nucleotidesAtu0332 and Atu0333 are separated by 152 nucleotides Atu0329: Atu0329 - GRPE protein, at 323,105 to 323,740 Atu0329 Atu0330: Atu0330 - nitrogen regulatory IIA protein, at 323,822 to 324,283 Atu0330 Atu0331: Atu0331 - sigma-54 modulation protein, at 324,366 to 324,938 Atu0331 Atu0332: Atu0332 - RNA polymerase sigma-54 factor, at 325,172 to 326,716 Atu0332 Atu0333: Atu0333 - ABC transporter, nucleotide binding/ATPase protein, at 326,869 to 327,678 Atu0333
Group Condition Atu0329 Atu0330 Atu0331 Atu0332 Atu0333
carbon source NAG (C) N.D. N.D. -5.5 +0.1 N.D.
nitrogen source L-Arginine (N) N.D. N.D. -0.4 -4.5 N.D.
carbon source NAG (C) N.D. N.D. -4.8 -0.1 N.D.
nitrogen source L-Ornithine (N) N.D. N.D. -0.9 -3.7 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. -4.5 -0.1 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -4.2 -0.2 N.D.
stress R2A with m-arsenite 0.8 mM N.D. N.D. -5.1 +0.9 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -4.0 -0.2 N.D.
stress R2A with Strontium chloride 750 mM N.D. N.D. -3.9 -0.2 N.D.
nitrogen source L-Arginine (N) N.D. N.D. -0.0 -4.1 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -4.0 -0.1 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -4.2 +0.1 N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -3.8 -0.3 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -4.2 +0.2 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -3.7 -0.3 N.D.
carbon source D-Galacturonic Acid (C) N.D. N.D. -3.6 -0.4 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -4.2 +0.3 N.D.
nitrogen source L-Ornithine (N) N.D. N.D. -0.5 -3.5 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -3.9 -0.0 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -3.3 -0.6 N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -3.8 -0.0 N.D.
nitrogen source nitrate (N) N.D. N.D. -0.5 -3.4 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -4.0 +0.1 N.D.
carbon source D-Galacturonic Acid (C) N.D. N.D. -3.6 -0.2 N.D.
nitrogen source 3-aminobutyric (N) N.D. N.D. -0.8 -3.0 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -3.4 -0.3 N.D.
stress R2A with m-arsenite 0.8 mM N.D. N.D. -4.4 +0.8 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -3.6 +0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. N.D. -3.5 +0.4 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -3.4 +0.5 N.D.
remove
Atu0329
plot		 remove
Atu0330
plot		 remove
Atu0331		 remove
Atu0332
plot		 remove
Atu0333
plot