Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0326 and Atu0327 are separated by 17 nucleotidesAtu0327 and Atu0328 are separated by 136 nucleotidesAtu0328 and Atu0329 are separated by 114 nucleotidesAtu0329 and Atu0330 are separated by 81 nucleotides Atu0326: Atu0326 - putative deoxyribonucleotide triphosphate pyrophosphatase, at 320,384 to 321,028 Atu0326 Atu0327: Atu0327 - ribonuclease PH, at 321,046 to 321,762 Atu0327 Atu0328: Atu0328 - heat-inducible transcription repressor, at 321,899 to 322,990 Atu0328 Atu0329: Atu0329 - GRPE protein, at 323,105 to 323,740 Atu0329 Atu0330: Atu0330 - nitrogen regulatory IIA protein, at 323,822 to 324,283 Atu0330
Group Condition Atu0326 Atu0327 Atu0328 Atu0329 Atu0330
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. -1.9 N.D. N.D.
carbon source L-ascorbate (C) N.D. N.D. -1.6 N.D. N.D.
carbon source L-ascorbate (C) N.D. N.D. -1.6 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. -1.5 N.D. N.D.
stress R2A with Vancomycin 0.009 mM N.D. N.D. -1.5 N.D. N.D.
stress R2A with Vancomycin 0.009 mM N.D. N.D. -1.4 N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -1.3 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.3 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.2 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.1 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.1 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.1 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. -1.1 N.D. N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.1 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -1.0 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.0 N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -1.0 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. -0.9 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.9 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.9 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. -0.9 N.D. N.D.
nitrogen source Choline chloride (N) N.D. N.D. -0.9 N.D. N.D.
no phage P1L4 N.D. N.D. -0.9 N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. -0.9 N.D. N.D.
carbon source Dihydroxyacetone (C) N.D. N.D. +1.4 N.D. N.D.
carbon source Dihydroxyacetone (C) N.D. N.D. +1.4 N.D. N.D.
stress R2A with m-arsenite 0.8 mM N.D. N.D. +2.3 N.D. N.D.
carbon source L-Sorbose (C) N.D. N.D. +2.4 N.D. N.D.
carbon source L-Sorbose (C) N.D. N.D. +2.5 N.D. N.D.
stress R2A with m-arsenite 0.8 mM N.D. N.D. +2.7 N.D. N.D.
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