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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu0292 and Atu0293 are separated by 300 nucleotides
Atu0293 and Atu0294 are separated by 159 nucleotides
Atu0294 and Atu0295 are separated by 239 nucleotides
Atu0295 and Atu0296 are separated by 88 nucleotides
Atu0292: Atu0292 - iron-sulfur cluster binding protein, at 286,657 to 287,637
Atu0292
Atu0293: Atu0293 - glutathione S-transferase, at 287,938 to 288,630
Atu0293
Atu0294: Atu0294 - undecaprenyl pyrophosphate phosphatase, possible bacitracin resistance protein, at 288,790 to 289,596
Atu0294
Atu0295: Atu0295 - hypothetical protein, at 289,836 to 290,066
Atu0295
Atu0296: Atu0296 - NADH-ubiquinone oxidoreductase, at 290,155 to 291,135
Atu0296
Group
Condition
Atu0292
Atu0293
Atu0294
Atu0295
Atu0296
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.7
N.D.
-0.4
-2.8
+0.7
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.5
N.D.
-0.3
-2.0
-0.4
stress
R2A with Vancomycin 0.009 mM
-0.5
N.D.
-0.0
-1.9
-0.5
stress
R2A with Vancomycin 0.009 mM
-0.4
N.D.
+0.1
-1.3
-0.6
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
N.D.
-0.2
-0.6
-1.4
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
N.D.
+0.1
-1.5
-0.7
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
N.D.
-0.3
-0.1
-1.6
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.4
N.D.
-0.0
-0.3
-1.1
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
N.D.
+0.2
-0.3
-1.5
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
N.D.
+0.0
-0.9
-0.5
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
N.D.
+0.1
-0.8
-0.7
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
N.D.
+0.1
-0.3
-1.3
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
N.D.
-0.8
+0.3
-0.6
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
N.D.
+0.4
-0.7
-0.5
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
N.D.
+0.5
-0.4
-1.1
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.4
N.D.
-0.5
+0.7
-0.8
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.4
N.D.
+1.0
-0.7
-0.8
stress
R2A with Gentamicin 0.00125 mM
-0.6
N.D.
+0.1
-0.8
+0.4
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.7
N.D.
+0.3
+0.3
-0.4
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
N.D.
+0.4
+0.0
-1.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.8
N.D.
-0.1
+1.0
-0.3
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.4
N.D.
-0.2
+0.9
-0.5
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.4
N.D.
-0.2
+1.1
-0.5
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
N.D.
-0.3
+1.6
-0.7
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
N.D.
+0.3
+0.7
-0.4
phage
Phage 95.3 + bacteria
+0.0
N.D.
+0.4
+0.8
-0.6
no phage
P2L4
-0.3
N.D.
+0.3
+1.0
-0.5
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
N.D.
+0.5
+0.5
-0.6
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.6
N.D.
-0.2
+2.0
+0.2
nitrogen source
DL-2-Aminobutyric (N)
+1.1
N.D.
-0.5
+0.1
+1.1
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