Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0279 and Atu0280 are separated by 141 nucleotidesAtu0280 and Atu0281 are separated by 74 nucleotidesAtu0281 and Atu0282 are separated by 83 nucleotidesAtu0282 and Atu0283 overlap by 4 nucleotides Atu0279: Atu0279 - transcriptional regulator, TetR family, at 273,790 to 274,368 Atu0279 Atu0280: Atu0280 - hypothetical protein, at 274,510 to 274,998 Atu0280 Atu0281: Atu0281 - GMP synthase, at 275,073 to 276,650 Atu0281 Atu0282: Atu0282 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, at 276,734 to 277,372 Atu0282 Atu0283: Atu0283 - hypothetical protein, at 277,369 to 277,818 Atu0283
Group Condition Atu0279 Atu0280 Atu0281 Atu0282 Atu0283
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -5.4 N.D. -0.2 -0.3
carbon source D-Saccharic potassium salt (C) -0.2 -2.3 N.D. -0.4 +0.0
phage AgroPhage_F10 +0.2 -2.8 N.D. -0.4 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -2.0 N.D. +0.0 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -2.5 N.D. +0.5 -0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.8 N.D. -1.6 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -1.9 N.D. +0.1 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -1.9 N.D. -0.6 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 -1.5 N.D. -0.2 -0.0
phage Phage 95.3 + bacteria -0.1 -1.5 N.D. +0.0 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.9 N.D. -0.4 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.6 N.D. +0.1 -0.2
phage AgroPhage_E10 +0.1 -1.6 N.D. +0.3 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -1.5 N.D. -0.1 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -1.2 N.D. +0.4 -0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -1.3 N.D. +0.4 +0.4
phage AgroPhage_C10 -0.5 +0.9 N.D. -0.5 +0.2
stress R2A with m-arsenite 0.8 mM +0.1 +0.9 N.D. -0.9 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +1.3 N.D. -0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +1.2 N.D. -0.2 -0.2
nophagecontrol No phage control +0.4 +0.8 N.D. +0.2 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.7 N.D. +0.6 -0.4
phage AgroPhage_E04 +0.2 +1.4 N.D. +0.0 -0.4
stress R2A with Vancomycin 0.009 mM +0.9 +0.4 N.D. +0.4 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +1.1 N.D. +0.1 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +1.5 N.D. +0.2 -0.1
no phage P1L5 +0.1 +1.5 N.D. +0.0 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +1.8 N.D. +0.3 -0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +1.7 N.D. +0.3 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +1.4 N.D. +0.5 +0.4
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