Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0277 and Atu0278 are separated by 86 nucleotidesAtu0278 and Atu0279 overlap by 2 nucleotidesAtu0279 and Atu0280 are separated by 141 nucleotidesAtu0280 and Atu0281 are separated by 74 nucleotides Atu0277: Atu0277 - hypothetical protein, at 272,422 to 272,817 Atu0277 Atu0278: Atu0278 - hypothetical protein, at 272,904 to 273,791 Atu0278 Atu0279: Atu0279 - transcriptional regulator, TetR family, at 273,790 to 274,368 Atu0279 Atu0280: Atu0280 - hypothetical protein, at 274,510 to 274,998 Atu0280 Atu0281: Atu0281 - GMP synthase, at 275,073 to 276,650 Atu0281
Group Condition Atu0277 Atu0278 Atu0279 Atu0280 Atu0281
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 +0.1 -5.4 N.D.
phage AgroPhage_F10 +0.1 -0.3 +0.2 -2.8 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.0 -0.4 -2.0 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 +0.3 -2.5 N.D.
carbon source D-Saccharic potassium salt (C) +0.4 +0.0 -0.2 -2.3 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.0 -0.0 -1.9 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.2 +0.1 -1.2 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 +0.1 -0.1 -1.5 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.2 +0.5 -1.9 N.D.
phage AgroPhage_E10 -0.3 +0.0 +0.1 -1.6 N.D.
nophagecontrol No phage control -0.1 -0.0 -0.5 -1.0 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 +0.4 -1.5 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.4 -1.3 N.D.
phage Phage 95.3 + bacteria +0.2 +0.3 -0.1 -1.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.0 +0.1 -1.6 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.4 -0.7 +1.3 N.D.
phage AgroPhage_F03 -0.5 +0.1 -0.4 +0.7 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.2 -0.7 -0.1 N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.1 +0.4 -0.9 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +0.1 +0.3 -0.6 N.D.
no phage P1L5 -0.1 -0.1 +0.1 +1.5 N.D.
no phage P5L5 +0.4 -0.0 -0.1 +1.3 N.D.
phage AgroPhage_C10 +0.8 +0.5 -0.5 +0.9 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.2 +1.4 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.2 +1.2 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 -0.1 +1.5 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -0.1 +1.7 N.D.
stress R2A with Vancomycin 0.009 mM +0.6 +0.2 +0.9 +0.4 N.D.
phage AgroPhage_E04 +0.4 +0.1 +0.2 +1.4 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 +0.0 +1.8 N.D.
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