Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0259 and Atu0260 are separated by 59 nucleotidesAtu0260 and Atu0261 are separated by 116 nucleotidesAtu0261 and Atu0262 are separated by 0 nucleotidesAtu0262 and Atu0263 are separated by 1 nucleotides Atu0259: Atu0259 - phenylalanyl-tRNA synthetase beta chain, at 255,544 to 257,967 Atu0259 Atu0260: Atu0260 - aldo-keto reductase, at 258,027 to 259,028 Atu0260 Atu0261: Atu0261 - transcriptional regulator, LysR family, at 259,145 to 260,035 Atu0261 Atu0262: Atu0262 - acetyltransferase, at 260,036 to 260,479 Atu0262 Atu0263: Atu0263 - oxidoreductase, at 260,481 to 261,431 Atu0263
Group Condition Atu0259 Atu0260 Atu0261 Atu0262 Atu0263
nitrogen source D-Lysine (N) N.D. -0.1 -0.0 -0.9 -0.8
nitrogen source D-Lysine (N) N.D. +0.1 -0.1 -0.9 -0.9
in planta Bethi_Library_OD0.01 N.D. -0.0 -0.4 -0.4 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 -0.4 -0.3 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 +0.1 -0.7 +0.0
carbon source D-Saccharic potassium salt (C) N.D. +0.1 +0.2 -0.3 -0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 +0.3 -0.7 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.2 +0.2 +0.2 -0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 +0.4 -0.3 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 +0.2 -0.6 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.1 -0.2 +0.3 -0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 +0.1 -0.2 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 +0.3 -0.2 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 -0.0 +0.6 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 +0.4 -0.3 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.0 -0.3 +0.8 -0.3
phage AgroPhage_F10 N.D. +0.3 -0.3 -0.3 +0.5
stress Chloramphenicol 12.5 ug/mL N.D. +0.5 +0.2 -0.1 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 -0.1 +0.7 +0.2
lb_sorghum b5 999 LB_Sorghum B5 999 N.D. -0.1 +0.0 +0.5 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 -0.2 +0.5 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 -0.1 +0.1 +0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 +0.0 +0.6 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 -0.1 +0.6 +0.5
phage AgroPhage_F04 N.D. -0.2 +0.1 +0.3 +0.5
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 +0.1 +0.5 -0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 +0.4 +0.3 +0.4
nitrogen source DL-2-Aminobutyric (N) N.D. -0.5 +0.7 +0.9 -0.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.3 +0.0 +0.3 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.1 +0.3 +0.9 +0.0
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