Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0247 and Atu0248 are separated by 137 nucleotidesAtu0248 and Atu0249 are separated by 3 nucleotidesAtu0249 and Atu0250 are separated by 127 nucleotidesAtu0250 and Atu0251 are separated by 206 nucleotides Atu0247: Atu0247 - hypothetical protein, at 245,112 to 246,185 Atu0247 Atu0248: Atu0248 - transcriptional regulator, AraC family, at 246,323 to 247,420 Atu0248 Atu0249: Atu0249 - ABC transporter, substrate binding protein (sugar), at 247,424 to 248,527 Atu0249 Atu0250: Atu0250 - hypothetical protein, at 248,655 to 249,062 Atu0250 Atu0251: Atu0251 - hypothetical protein, at 249,269 to 250,252 Atu0251
Group Condition Atu0247 Atu0248 Atu0249 Atu0250 Atu0251
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.0 -0.2 -0.5 -2.9
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 -0.5 -0.4 -1.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.5 +0.2 -0.4 -2.0
nitrogen source L-Cysteine (N) +0.0 +0.0 -0.3 -0.1 -2.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 +0.1 -0.5 -2.0
nitrogen source L-Cysteine (N) +0.1 -0.0 -0.0 -0.1 -2.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 +0.1 -0.3 -1.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 +0.2 -0.3 -2.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.8 +0.0 -0.4 -1.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.0 -0.2 -0.1 -1.8
lb_sorghum x54 243 LB_Sorghum X54 243 +0.1 -0.1 +0.1 -0.5 -1.3
nitrogen source L-pyroglutamic (N) -0.1 -0.1 -0.0 +0.2 -1.5
lb control LB control -0.0 -0.1 +0.2 +0.1 -1.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.3 -0.3 -1.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.0 +0.4 -0.4 -0.9
lb_sorghum btx 642 LB_Sorghum Btx 642 +0.1 -0.1 +0.1 -0.3 -1.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.0 +0.3 -0.2 -1.8
lb control LB control +0.1 -0.2 +0.2 -0.1 -1.3
lb_sorghum ss 20 LB_Sorghum SS 20 +0.2 -0.1 +0.1 -0.2 -1.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.1 +0.4 -0.0 -1.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.5 +0.7 +0.4 -1.6
stress R2A with Vancomycin 0.009 mM -0.1 -0.2 -1.2 +0.3 +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 -0.3 -0.3 -0.6
stress R2A with Vancomycin 0.009 mM -0.1 +0.1 -1.5 +0.5 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 -0.2 +0.4 -1.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.1 +1.0 -0.9
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.2 -0.1 +0.6 -0.7
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 +0.3 +0.6 -0.6
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.1 +0.0 +0.4 -0.8
nitrogen source DL-2-Aminobutyric (N) +0.0 +0.5 -0.8 +1.0 +3.2
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