Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0241 and Atu0242 are separated by 72 nucleotidesAtu0242 and Atu0243 overlap by 4 nucleotidesAtu0243 and Atu8117 are separated by 66 nucleotidesAtu8117 and Atu0245 are separated by 96 nucleotides Atu0241: Atu0241 - GTP-binding protein LepA, at 240,039 to 241,865 Atu0241 Atu0242: Atu0242 - carbon-nitrogen hydrolase, at 241,938 to 242,807 Atu0242 Atu0243: Atu0243 - hypothetical protein, at 242,804 to 243,415 Atu0243 Atu8117: Atu8117 - hypothetical protein, at 243,482 to 243,883 Atu8117 Atu0245: Atu0245 - transcriptional regulator, at 243,980 to 244,561 Atu0245
Group Condition Atu0241 Atu0242 Atu0243 Atu8117 Atu0245
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 -0.6 -1.4 +0.3
phage AgroPhage_E04 N.D. -0.4 +0.0 -0.7 -0.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -0.1 -0.4 -1.0 -0.2
phage AgroPhage_B07 N.D. -0.0 -0.1 -1.1 -0.5
phage AgroPhage_F03 N.D. -0.1 -0.3 -0.8 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 -0.1 -1.0 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. -0.2 -0.2 -1.0 +0.0
phage AgroPhage_H04 N.D. -0.0 -0.1 -1.0 -0.3
nophagecontrol No phage control N.D. -0.3 -0.4 -0.5 -0.2
lb_sorghum btx 430 LB_Sorghum Btx 430 N.D. -0.2 -0.2 -1.0 +0.1
lb_sorghum btx 430 LB_Sorghum Btx 430 N.D. -0.2 -0.0 -0.9 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. -0.1 -0.1 -0.8 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 +0.1 -1.2 +0.1
phage AgroPhage_H10 N.D. +0.1 -0.4 -0.6 -0.1
phage AgroPhage_C10 N.D. -0.1 -0.5 -0.8 +0.5
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 +0.2 -0.4 -0.2
phage AgroPhage_B01 N.D. +0.1 -0.2 -0.9 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 +0.3 +0.0 -1.0
phage AgroPhage_E10 N.D. -0.1 -0.4 -0.4 +0.5
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 +0.3 -0.4 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 +0.2 -0.7 +0.6
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 -0.6 +0.4 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 +0.0 +0.6 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 -0.7 +0.4 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 +0.5 -0.1 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 -0.0 -0.2 +1.0
stress R2A with Nickel (II) chloride 0.05 mM N.D. +0.2 +0.2 +0.5 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 +0.5 +0.5 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 +0.4 +0.6 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -0.3 +0.1 +0.1 +1.3
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