Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu0237 and Atu0238 are separated by 154 nucleotidesAtu0238 and Atu0239 overlap by 4 nucleotidesAtu0239 and Atu0240 overlap by 26 nucleotidesAtu0240 and Atu0241 are separated by 67 nucleotides Atu0237: Atu0237 - hypothetical protein, at 237,190 to 237,648 Atu0237 Atu0238: Atu0238 - oxidoreductase, at 237,803 to 238,696 Atu0238 Atu0239: Atu0239 - transcriptional regulator, AraC family, at 238,693 to 239,589 Atu0239 Atu0240: Atu0240 - hypothetical protein, at 239,564 to 239,971 Atu0240 Atu0241: Atu0241 - GTP-binding protein LepA, at 240,039 to 241,865 Atu0241
Group Condition Atu0237 Atu0238 Atu0239 Atu0240 Atu0241
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -1.9 -0.3 -0.1 -0.0 N.D.
nophagecontrol No phage control -1.0 -0.3 -0.4 -0.6 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -1.3 -0.4 -0.1 -0.3 N.D.
phage AgroPhage_E04 -0.8 -0.3 -0.2 -0.7 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -1.2 -0.2 -0.2 -0.3 N.D.
lb_tobacco_leaf LB_Tobacco_Leaf -1.5 -0.2 -0.1 +0.1 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -1.3 -0.3 -0.1 +0.0 N.D.
lb_tobacco_leaf LB_Tobacco_Leaf -1.4 -0.2 -0.0 -0.0 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.2 -0.0 -0.1 -0.3 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 +0.3 -0.2 -0.2 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.2 -0.1 +0.2 -0.3 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.1 +0.3 -0.3 -0.2 N.D.
phage AgroPhage_C10 -1.6 -0.2 +0.1 +0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.0 +0.1 +0.1 -0.4 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 -0.4 +0.0 +0.2 N.D.
phage AgroPhage_E10 -0.1 +0.3 -0.6 -0.6 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.1 -0.5 -0.1 +0.9 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 +0.3 +0.4 -0.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 +0.2 +0.2 -0.2 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.1 +0.5 -0.2 +0.1 N.D.
No phage control -1.4 +0.2 +0.3 +0.1 N.D.
Atjh14 -0.8 -0.1 -0.5 +0.7 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 +0.4 +0.0 +0.2 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.2 +0.3 +0.5 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 +0.2 +0.2 +0.6 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.7 +0.4 +0.2 +0.3 N.D.
phage AgroPhage_F04 -0.5 +0.6 -0.2 +0.4 N.D.
stress Chloramphenicol 12.5 ug/mL +1.1 -0.1 -0.4 +0.3 N.D.
nitrogen source DL-2-Aminobutyric (N) -0.2 +0.6 -0.1 +0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.7 -0.2 +0.9 N.D.
remove
Atu0237
plot		 remove
Atu0238
plot		 remove
Atu0239		 remove
Atu0240
plot		 remove
Atu0241
plot