Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0231 and Atu0232 are separated by 87 nucleotidesAtu0232 and Atu0233 are separated by 182 nucleotidesAtu0233 and Atu0234 are separated by 3 nucleotidesAtu0234 and Atu0235 are separated by 131 nucleotides Atu0231: Atu0231 - GMP synthase, at 232,091 to 232,765 Atu0231 Atu0232: Atu0232 - hypothetical protein, at 232,853 to 233,041 Atu0232 Atu0233: Atu0233 - lysozyme, at 233,224 to 234,321 Atu0233 Atu0234: Atu0234 - conserved hypothetical protein, membrane protein, at 234,325 to 235,200 Atu0234 Atu0235: Atu0235 - transcriptional regulator, GntR family, at 235,332 to 236,705 Atu0235
Group Condition Atu0231 Atu0232 Atu0233 Atu0234 Atu0235
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.3 -0.5 -0.3 -0.0
stress R2A with Tetracycline 0.002 mM -0.0 +0.2 -1.3 +0.1 +0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.3 -0.6 -0.3 +0.0
stress R2A with Strontium chloride 750 mM +0.0 +0.4 -1.4 -0.0 -0.0
stress R2A with Tetracycline 0.002 mM +0.1 +0.3 -1.2 -0.1 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 +0.4 -0.1 -0.1 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 -0.2 -0.9 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.7 -0.5 -0.2 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 -0.1 -0.8 -0.1
phage AgroPhage_D04 -0.3 -0.4 -0.3 +0.6 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.5 -0.1 +0.5 +0.1
phage AgroPhage_F04 -0.3 -0.1 -0.4 +0.7 -0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 -0.3 -0.4 -0.2
stress R2A with Azlocillin 0.2 mM -0.5 +0.1 +0.8 -0.1 -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.2 -0.2 -0.4 +0.2
nitrogen source DL-2-Aminobutyric (N) +0.8 -0.1 +0.5 -0.5 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.5 -0.4 +0.5 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.6 +0.5 +0.7 -0.0
no phage P4L5 -0.3 +0.6 +0.3 +0.2 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.8 +0.0 -0.3 -0.0
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -0.0 +0.0 +1.3 -0.2 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 -0.2 +0.4 +0.4
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM +0.2 +0.1 +1.2 -0.1 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.6 +0.1 +0.6 +0.5
stress R2A with Ticarcillin 0.01 mM -0.1 +0.3 +1.9 +0.1 +0.1
stress R2A with Ticarcillin 0.01 mM +0.1 +0.2 +1.8 +0.2 +0.0
stress R2A with Ceftazidime 4 mM +0.1 +0.0 +3.4 -0.1 -0.1
stress R2A with Ceftazidime 4 mM +0.1 +0.1 +3.6 -0.0 -0.0
stress R2A with Vancomycin 0.009 mM +0.5 -0.1 +7.8 +0.2 -0.1
stress R2A with Vancomycin 0.009 mM +0.2 -0.1 +9.6 +0.1 +0.0
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