Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0230 and Atu0231 overlap by 2 nucleotidesAtu0231 and Atu0232 are separated by 87 nucleotidesAtu0232 and Atu0233 are separated by 182 nucleotidesAtu0233 and Atu0234 are separated by 3 nucleotides Atu0230: Atu0230 - hypothetical protein, at 231,934 to 232,092 Atu0230 Atu0231: Atu0231 - GMP synthase, at 232,091 to 232,765 Atu0231 Atu0232: Atu0232 - hypothetical protein, at 232,853 to 233,041 Atu0232 Atu0233: Atu0233 - lysozyme, at 233,224 to 234,321 Atu0233 Atu0234: Atu0234 - conserved hypothetical protein, membrane protein, at 234,325 to 235,200 Atu0234
Group Condition Atu0230 Atu0231 Atu0232 Atu0233 Atu0234
stress Erythromycin 12.5 ug/mL -0.2 -0.0 +0.0 -3.2 -0.0
stress Erythromycin 12.5 ug/mL +0.1 +0.1 +0.1 -2.7 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.2 -0.5 +0.2 -0.6 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.6 +0.2 +0.1 -0.7 -0.0
stress R2A with Tetracycline 0.002 mM -0.6 -0.0 +0.2 -1.3 +0.1
no phage P2L4 -1.6 -0.0 -0.2 +0.5 -0.2
Atjh2 -1.3 -0.3 -0.1 +0.2 +0.2
stress Erythromycin 6.25 ug/mL -0.7 -0.1 +0.1 -0.9 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.7 +0.0 +0.3 -0.2 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.5 +0.5 -0.0 +0.0 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.3 +0.7 -0.5 -0.2
stress R2A with Azlocillin 0.2 mM -0.8 -0.5 +0.1 +0.8 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 +0.0 +0.4 +0.4 -0.2
nitrogen source DL-2-Aminobutyric (N) -0.7 +0.8 -0.1 +0.5 -0.5
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 +0.1 -0.3 -0.7 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 +0.3 -0.2 -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 -0.3 -0.5 -0.1 +0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.2 +0.4 -0.1 -0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 -0.6 +0.5 +0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.1 +0.6 -0.4 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.3 +0.0 +0.5 -0.1 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.9 +0.1 +0.1 -0.3 +0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +3.0 +0.1 -0.2 -0.3 -0.1
stress R2A with Ticarcillin 0.01 mM +0.1 +0.1 +0.2 +1.8 +0.2
stress R2A with Ticarcillin 0.01 mM +0.3 -0.1 +0.3 +1.9 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.8 -0.1 +0.6 +0.1 +0.6
stress R2A with Ceftazidime 4 mM -0.0 +0.1 +0.1 +3.6 -0.0
stress R2A with Ceftazidime 4 mM +0.2 +0.1 +0.0 +3.4 -0.1
stress R2A with Vancomycin 0.009 mM -0.4 +0.5 -0.1 +7.8 +0.2
stress R2A with Vancomycin 0.009 mM +0.2 +0.2 -0.1 +9.6 +0.1
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