Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0213 and Atu0214 are separated by 58 nucleotidesAtu0214 and Atu0215 are separated by 142 nucleotidesAtu0215 and Atu0216 are separated by 63 nucleotidesAtu0216 and Atu0217 are separated by 9 nucleotides Atu0213: Atu0213 - nicotinate phosphoribosyltransferase, at 217,114 to 218,418 Atu0213 Atu0214: Atu0214 - leucine aminopeptidase, at 218,477 to 219,871 Atu0214 Atu0215: Atu0215 - hypothetical protein, at 220,014 to 220,838 Atu0215 Atu0216: Atu0216 - components of type IV pilus, at 220,902 to 221,888 Atu0216 Atu0217: Atu0217 - components of type IV pilus, at 221,898 to 222,902 Atu0217
Group Condition Atu0213 Atu0214 Atu0215 Atu0216 Atu0217
stress Chloramphenicol 12.5 ug/mL -0.2 -0.0 -0.5 -0.4 -0.2
carbon source L-Sorbose (C) -0.6 +0.2 -0.3 -0.2 -0.2
carbon source Stachyose (C) +0.1 +0.1 -0.1 -0.6 -0.5
carbon source Cellopentaose (C) +0.1 +0.2 -0.3 -0.4 -0.6
stress Erythromycin 12.5 ug/mL -0.4 +0.2 -0.2 -0.3 -0.3
stress R2A with m-arsenite 0.8 mM -1.1 +0.1 -0.0 +0.1 -0.0
carbon source D-Xylose (C) -0.0 +0.3 -0.2 -0.4 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 -0.1 -0.1 -0.5
carbon source methyl-beta-D-xylopyranoside (C) +0.3 -0.1 -0.2 -0.4 -0.3
carbon source alpha-Lactose (C) +0.5 +0.0 -0.2 -0.4 -0.3
stress R2A with m-arsenite 0.8 mM -0.8 +0.2 +0.1 +0.1 +0.0
carbon source D-Arabinose (C) +0.5 +0.1 -0.2 -0.1 -0.3
phage AgroPhage_E10 -0.2 +0.1 +0.3 +0.2 -0.6
carbon source D-Sorbitol (C) +0.6 +0.0 -0.1 -0.3 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 +0.3 -0.5 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.6 +0.1 -0.4 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 -0.3 +0.4 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 +0.3 +0.4 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.1 +0.3 +0.3 +0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.2 +0.3 +0.2 +0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.4 +0.5 -0.2 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.4 +0.1 +0.2 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.6 +0.4 -0.0 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -0.2 +0.6 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -0.1 +0.6 -0.1
nitrogen source DL-2-Aminobutyric (N) +0.6 +0.1 +0.2 +0.5 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.1 +0.1 +0.4 +0.3 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 +0.2 +0.5 +0.4 +0.1
stress R2A with Vancomycin 0.009 mM +0.1 -0.5 +1.3 +0.7 +0.5
stress R2A with Vancomycin 0.009 mM +0.4 -0.7 +1.8 +1.0 +0.7
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