Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu0205 and Atu0206 are separated by 111 nucleotidesAtu0206 and Atu0207 overlap by 4 nucleotidesAtu0207 and Atu0208 are separated by 206 nucleotidesAtu0208 and Atu0209 are separated by 290 nucleotides Atu0205: Atu0205 - methylmalonate-semialdehyde dehydrogenase, at 209,585 to 211,141 Atu0205 Atu0206: Atu0206 - hypothetical protein, at 211,253 to 211,570 Atu0206 Atu0207: Atu0207 - transcriptional regulator, LysR family, at 211,567 to 212,448 Atu0207 Atu0208: Atu0208 - hypothetical protein, at 212,655 to 213,491 Atu0208 Atu0209: Atu0209 - hypothetical protein, at 213,782 to 214,888 Atu0209
Group Condition Atu0205 Atu0206 Atu0207 Atu0208 Atu0209
carbon source m-Inositol (C) -6.5 -0.4 -5.6 -0.0 -0.0
carbon source m-Inositol (C) -6.1 -0.2 -6.1 -0.0 +0.0
carbon source Beta-alanine (C) -4.2 -0.5 -1.9 -0.1 -0.0
nitrogen source Beta-alanine (N) -3.6 -0.1 -2.9 +0.2 -0.1
carbon source Beta-alanine (C) -4.3 -0.2 -1.8 -0.0 -0.1
nitrogen source Beta-alanine (N) -3.3 -0.0 -2.8 +0.0 +0.0
carbon source L-(+)-Erythrulose (C) -2.4 +0.0 -0.2 -0.0 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 -0.9 -0.1 +0.2 -0.2
carbon source L-Sorbose (C) -1.8 -0.4 -0.0 -0.0 -0.0
carbon source a-Ketoglutaric (C) -1.7 -0.4 -0.2 -0.1 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.7 -0.3 -0.4 +0.2 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -1.7 -0.4 -0.0 -0.1 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.4 -0.6 -0.0 +0.0 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.9 +0.5 -0.1 -0.3 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.6 -0.3 -0.2 -0.0 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.6 -0.3 -0.1 -0.0 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -1.5 -0.5 +0.1 +0.0 -0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.5 -0.6 +0.2 +0.0 -0.1
carbon source Uridine 5-monophosphate (C) -1.8 -0.1 -0.1 +0.0 +0.1
carbon source L-Sorbose (C) -1.9 +0.7 -0.0 -0.0 -0.0
carbon source NAG (C) -1.5 +0.7 +0.0 -0.2 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.7 +0.4 +0.1 +0.4 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 +0.8 -0.2 -0.1 -0.7
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.3 +0.5 -0.0 +0.3 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.4 +0.4 +0.1 +0.3 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.3 +0.6 -0.0 -0.1 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.7 +1.3 +0.2 +0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 +1.3 -0.0 -0.1 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.4 +1.5 +0.8 +0.4 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.1 +1.9 -0.1 +0.2 +0.0
remove
Atu0205
plot		 remove
Atu0206
plot		 remove
Atu0207		 remove
Atu0208
plot		 remove
Atu0209
plot