Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0199 and Atu0200 are separated by 150 nucleotidesAtu0200 and Atu0201 are separated by 168 nucleotidesAtu0201 and Atu0202 are separated by 158 nucleotidesAtu0202 and Atu0203 are separated by 24 nucleotides Atu0199: Atu0199 - ABC transporter, substrate binding protein (proline/glycine/betaine), at 203,203 to 204,114 Atu0199 Atu0200: Atu0200 - hypothetical protein, at 204,265 to 205,311 Atu0200 Atu0201: Atu0201 - hypothetical protein, at 205,480 to 205,950 Atu0201 Atu0202: Atu0202 - ABC transporter, substrate binding protein (iron), at 206,109 to 207,173 Atu0202 Atu0203: Atu0203 - hypothetical protein, at 207,198 to 208,115 Atu0203
Group Condition Atu0199 Atu0200 Atu0201 Atu0202 Atu0203
phage AgroPhage_C04 -0.4 -0.1 -2.6 +0.1 -0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -2.4 +0.2 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.2 -1.8 -0.2 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.0 -1.6 -0.2 -0.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.3 -1.5 +0.1 +0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.0 +0.1 -1.4 -0.2 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.3 -1.5 +0.1 +0.1
stress R2A with bromate 5 mM -0.1 +0.2 -1.7 +0.0 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 -1.8 -0.2 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.3 -1.2 +0.2 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 -1.1 -0.2 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -1.3 +0.2 +0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 -1.0 +0.1 +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.2 -1.2 +0.2 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 -1.0 +0.2 +0.1
phage phage 95.1 +0.4 +0.2 -1.3 +0.2 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.1 -1.1 +0.1 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.6 -1.0 +0.1 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 -1.2 +0.3 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 -1.1 +0.1 +0.3
nitrogen source DL-2-Aminobutyric (N) +0.9 -1.1 -0.1 +0.3 +0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.8 +0.4 +0.6 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 +0.6 +0.2 +0.3
stress R2A with m-arsenite 0.8 mM +0.2 +0.2 +1.5 -0.5 -0.0
carbon source L-Sorbose (C) +0.1 -0.4 +2.0 -0.4 +0.1
phage AgroPhage_D10 +0.2 -0.0 +1.4 +0.2 -0.1
carbon source L-Sorbose (C) -0.2 -0.1 +2.2 -0.4 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.4 +0.5 +0.6 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.0 +1.8 -0.1 +0.2
stress R2A with m-arsenite 0.8 mM +0.2 +0.1 +2.5 -0.3 -0.0
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