Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0189 and Atu0190 are separated by 5 nucleotidesAtu0190 and Atu0193 are separated by 1523 nucleotidesAtu0193 and Atu0194 overlap by 26 nucleotidesAtu0194 and Atu0195 are separated by 99 nucleotides Atu0189: Atu0189 - ABC transporter, membrane spanning protein (peptide), at 192,608 to 193,753 Atu0189 Atu0190: Atu0190 - ABC transporter, nucleotide binding/ATPase protein (peptide), at 193,759 to 195,399 Atu0190 Atu0193: Atu0193 - glutamine synthetase, at 196,923 to 198,281 Atu0193 Atu0194: Atu0194 - oxidoreductase, at 198,256 to 199,584 Atu0194 Atu0195: Atu0195 - gluconokinase, at 199,684 to 200,175 Atu0195
Group Condition Atu0189 Atu0190 Atu0193 Atu0194 Atu0195
stress R2A with Azlocillin 0.2 mM -8.3 -6.3 -0.2 +0.1 +0.0
stress R2A with Azlocillin 0.2 mM -4.6 -5.8 +0.0 +0.1 +0.0
stress R2A with hypochlorite 6.25 mM -4.7 -4.3 +0.2 -0.0 -0.3
carbon source L-ascorbate (C) -1.5 -1.3 -0.1 -0.3 -5.9
lb_maize LB_Maize -5.0 -3.2 +0.1 -0.1 -0.1
lb_wheat LB_wheat -4.1 -3.2 -0.4 -0.3 +0.1
stress R2A with m-arsenite 0.8 mM -4.9 -3.5 -0.1 +0.6 -0.1
lb_maize LB_Maize -4.1 -3.1 -0.0 -0.0 -0.1
lb control LB control -4.3 -2.6 -0.2 -0.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -5.1 -1.3 -0.8 -0.1 +0.2
lb_wheat LB_wheat -3.2 -3.3 -0.4 -0.4 +0.3
lb control LB control -3.2 -3.7 -0.0 -0.2 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -6.4 -1.7 +0.4 +0.1 +0.6
benthi_leaf_lb with c58c1od0.075 Benthi_leaf_C58C1OD0.075 -5.1 -1.6 -0.0 -0.1 -0.2
carbon source L-ascorbate (C) -1.1 -1.5 +0.4 -0.3 -4.2
phage Phage 95.2 + bacteria -3.0 -2.7 -0.0 -0.0 -0.3
stress R2A with Gentamicin 0.00125 mM -4.3 -2.3 +0.3 +0.1 +0.2
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -3.3 -2.8 +0.0 +0.0 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.6 -1.8 -0.0 -0.1 +0.7
phage Phage 95.1 + bacteria -3.0 -2.6 -0.1 -0.0 -0.1
stress R2A with Chloride 700 mM -3.1 -3.2 +0.4 +0.1 -0.0
phage Phage 100.3 + bacteria -3.1 -2.5 +0.1 +0.0 -0.2
phage Phage 95.1 + bacteria -2.7 -2.5 -0.2 -0.1 -0.2
phage Phage 95.3 + bacteria -3.3 -2.0 -0.2 -0.0 +0.0
phage Phage 100.1 + bacteria -2.5 -2.3 -0.3 +0.0 -0.3
benthi_leaf_lb with c58c1od2.0 Benthi_leaf_C58C1OD2.0 -3.8 -1.3 -0.1 +0.0 +0.1
stress R2A with Strontium chloride 750 mM -2.0 -2.8 -0.4 -0.0 +0.2
stress R2A with m-arsenite 0.8 mM -2.2 -3.1 +0.1 +0.6 -0.1
stress R2A with Vancomycin 0.009 mM +2.7 +2.8 -0.0 +0.4 +0.0
stress R2A with Vancomycin 0.009 mM +3.5 +3.4 -0.4 +0.4 -0.2
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