Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu0175 and Atu0176 overlap by 4 nucleotidesAtu0176 and Atu0177 are separated by 67 nucleotidesAtu0177 and Atu0178 overlap by 4 nucleotidesAtu0178 and Atu0179 are separated by 133 nucleotides Atu0175: Atu0175 - acetyltransferase, at 179,560 to 180,177 Atu0175 Atu0176: Atu0176 - ABC transporter, nucleotide binding/ATPase protein (phosphonate), at 180,174 to 180,881 Atu0176 Atu0177: Atu0177 - ABC transporter, nucleotide binding/ATPase protein (phosphonate), at 180,949 to 181,725 Atu0177 Atu0178: Atu0178 - hypothetical protein, at 181,722 to 182,624 Atu0178 Atu0179: Atu0179 - hypothetical protein, at 182,758 to 183,867 Atu0179
Group Condition Atu0175 Atu0176 Atu0177 Atu0178 Atu0179
stress R2A with Phosphomycin 50 mM +0.1 -1.4 -1.3 -1.3 -1.4
stress R2A with Phosphomycin 50 mM -0.1 -1.4 -1.2 -1.2 -1.1
phage AgroPhage_E10 -1.1 +0.3 +0.0 -0.0 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 +0.2 -0.4 -0.1 -0.3
phage AgroPhage_E04 -0.2 -0.5 +0.5 +0.2 -0.6
phage AgroPhage_B01 -0.0 -0.2 +0.4 -0.3 -0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.2 -0.2 +0.2 -0.2
phage AgroPhage_F10 +0.0 -0.2 +0.3 +0.2 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.1 +0.1 -0.5 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 +0.1 +0.3 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.6 +0.1 +0.4 +0.0 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.8 +0.3 +0.5 -0.1 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 +0.2 +0.2 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 +0.3 +0.5 +0.1 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.4 +0.2 +0.5 +0.1 +0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 +0.2 +0.2 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.6 +0.7 +0.1 -0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -0.2 +0.4 +0.2
phage AgroPhage_B07 -0.2 +0.1 +0.7 +0.1 -0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.3 +0.3 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.2 -0.1 -0.0 +0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 +0.0 -0.2 +0.6
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.4 -0.1 -0.2 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.4 -0.1 +0.3 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 -0.2 -0.2 +0.3 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.4 +0.1 +0.4 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 +0.5 +0.3 +0.0 +0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 -0.1 +0.3 +0.2 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.1 +0.4 +0.0 +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.5 +0.1 +0.5 +0.2
remove
Atu0175
plot		 remove
Atu0176
plot		 remove
Atu0177		 remove
Atu0178
plot		 remove
Atu0179
plot