Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0174 and Atu0175 are separated by 216 nucleotidesAtu0175 and Atu0176 overlap by 4 nucleotidesAtu0176 and Atu0177 are separated by 67 nucleotidesAtu0177 and Atu0178 overlap by 4 nucleotides Atu0174: Atu0174 - ABC transporter, nucleotide binding/ATPase protein (phosphonate), at 178,483 to 179,343 Atu0174 Atu0175: Atu0175 - acetyltransferase, at 179,560 to 180,177 Atu0175 Atu0176: Atu0176 - ABC transporter, nucleotide binding/ATPase protein (phosphonate), at 180,174 to 180,881 Atu0176 Atu0177: Atu0177 - ABC transporter, nucleotide binding/ATPase protein (phosphonate), at 180,949 to 181,725 Atu0177 Atu0178: Atu0178 - hypothetical protein, at 181,722 to 182,624 Atu0178
Group Condition Atu0174 Atu0175 Atu0176 Atu0177 Atu0178
stress R2A with Phosphomycin 50 mM -0.0 -0.1 -1.4 -1.2 -1.2
stress R2A with Phosphomycin 50 mM +0.1 +0.1 -1.4 -1.3 -1.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.6 -0.1 -0.1 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 -0.5 +0.1 +0.0
phage AgroPhage_E10 +0.1 -1.1 +0.3 +0.0 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 -0.2 +0.2 +0.2
phage AgroPhage_E04 -0.2 -0.2 -0.5 +0.5 +0.2
nophagecontrol No phage control -0.3 -0.1 -0.3 +0.4 +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 +0.2 -0.2 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 -0.5 +0.2 +0.3 -0.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.1 -0.4 +0.5 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 -0.7 +0.3 +0.5 -0.1
nophagecontrol No phage control -0.4 +0.3 -0.1 +0.4 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.3 -0.6 +0.7 +0.1
nophagecontrol No phage control +0.3 -0.1 -0.3 +0.3 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -0.2 -0.2 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 -0.4 +0.3 +0.5 +0.1
phage AgroPhage_B07 -0.2 -0.2 +0.1 +0.7 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 +0.5 +0.2 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.5 -0.2 -0.2 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.4 +0.3 +0.2 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.4 +0.2 +0.1 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.2 -0.4 +0.2 +0.5 +0.1
nitrogen source DL-2-Aminobutyric (N) +0.8 -0.2 +0.2 -0.1 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.6 -0.0 -0.1 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 -0.1 +0.5 +0.3 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.1 +0.4 +0.1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.3 +0.4 -0.1 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.1 +0.3 +0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.3 +0.5 +0.1 +0.5
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