Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0164 and Atu0165 are separated by 220 nucleotidesAtu0165 and Atu0166 are separated by 137 nucleotidesAtu0166 and Atu0167 are separated by 71 nucleotidesAtu0167 and Atu0168 are separated by 87 nucleotides Atu0164: Atu0164 - putative malate dehydrogenase, at 169,337 to 170,326 Atu0164 Atu0165: Atu0165 - hypothetical protein, at 170,547 to 170,792 Atu0165 Atu0166: Atu0166 - hypothetical protein, at 170,930 to 171,184 Atu0166 Atu0167: Atu0167 - transcriptional regulator, AraC family, at 171,256 to 172,296 Atu0167 Atu0168: Atu0168 - guanylate kinase, at 172,384 to 172,935 Atu0168
Group Condition Atu0164 Atu0165 Atu0166 Atu0167 Atu0168
nitrogen source DL-2-Aminobutyric (N) -0.3 +0.0 -1.2 -1.1 -0.3
stress Erythromycin 12.5 ug/mL +0.0 -0.8 -0.6 -0.7 -0.6
phage AgroPhage_C04 -0.0 -0.9 -0.1 -0.7 -0.6
phage AgroPhage_D10 -0.0 -0.3 -0.8 -0.8 +0.1
stress Erythromycin 12.5 ug/mL +0.0 -0.1 -0.5 -0.6 -0.7
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 -1.3 -0.1 -0.3
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 -0.4 -1.2 +0.3 -0.1
phage phage 99.2 -0.0 -0.7 -0.8 -0.2 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 -1.6 -0.4 +0.1
stress Chloramphenicol 6.25 ug/mL +0.1 -0.5 -0.5 +0.2 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 -1.0 -0.4 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.1 -0.9 +0.4 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.5 +0.4 -0.2 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.1 +0.7 -0.4 -1.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 +0.4 -0.3 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.1 +0.4 -1.0 +0.2
r2a_control R2A control +0.1 +0.1 -1.0 +0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 +0.7 -0.5 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.8 +0.5 +0.4 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.6 +0.3 -0.4 -0.5
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.9 +1.4 -0.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.0 +0.6 -0.3 +0.6 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 -0.4 +0.2 +0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 -1.0 +0.7 +0.4
no phage P2L5 +0.3 -0.3 +0.6 -0.1 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.8 -0.3 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.1 -0.4 +0.0 +0.3 +1.0
phage AgroPhage_F04 -0.1 +0.5 +1.0 +0.1 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.5 +0.8 +0.5 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.7 +1.1 +0.3 +0.2
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