Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu8116 and Atu0156 are separated by 12 nucleotidesAtu0156 and Atu0157 are separated by 146 nucleotidesAtu0157 and Atu0158 are separated by 138 nucleotidesAtu0158 and Atu0159 overlap by 1 nucleotides Atu8116: Atu8116 - hypothetical protein, at 161,618 to 162,136 Atu8116 Atu0156: Atu0156 - hypothetical protein, at 162,149 to 162,859 Atu0156 Atu0157: Atu0157 - ABC transporter, substrate binding protein, at 163,006 to 164,007 Atu0157 Atu0158: Atu0158 - ABC transporter, membrane spanning protein, at 164,146 to 164,919 Atu0158 Atu0159: Atu0159 - ABC transporter, nucleotide binding/ATPase protein, at 164,919 to 165,704 Atu0159
Group Condition Atu8116 Atu0156 Atu0157 Atu0158 Atu0159
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.0 +0.4 -0.1 -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 +0.2 +0.4 -0.5
r2a_control R2A control +1.0 -0.5 +0.0 +0.1 +0.0
stress R2A with nitrate 375 mM +1.1 -0.3 -0.1 -0.1 +0.3
r2a_control R2A control +1.2 -0.2 -0.0 +0.1 -0.0
r2a_control R2A control +1.3 -0.1 -0.1 -0.1 +0.2
stress R2A with mercury (II) chloride 0.002 mM +1.1 -0.2 -0.0 +0.1 +0.2
r2a_control R2A control +1.0 +0.2 -0.2 -0.1 +0.2
stress R2A with mercury (II) chloride 0.002 mM +1.2 +0.1 -0.1 -0.0 +0.1
r2a_control R2A control +1.3 -0.1 +0.0 +0.1 +0.1
stress R2A with Neomycin 0.002 mM +1.3 +0.2 -0.0 -0.2 +0.1
stress R2A with Rifampicin 0.0007 mM +1.3 +0.3 +0.1 -0.1 -0.1
r2a_control R2A control +1.1 +0.2 +0.1 -0.0 +0.1
phage AgroPhage_D04 +1.4 +0.0 +0.2 -0.1 +0.0
stress R2A with Cesium chloride 1.75 mM +1.3 +0.2 -0.0 -0.1 +0.1
stress R2A with vanadium chloride 0.08 mM +1.0 +0.4 +0.1 -0.1 +0.1
stress R2A with Oxytetracycline 0.0002 mM +1.4 -0.2 +0.1 +0.2 +0.2
stress R2A with sodium fluoride 0.2 mM +1.3 +0.3 -0.0 -0.0 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.6 +0.7 -0.2 +0.0
stress R2A with Cobalt chloride 0.02 mM +1.5 -0.1 +0.1 +0.2 -0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.5 +0.3 +0.2 +0.3
r2a_control R2A control +1.3 +0.2 +0.1 +0.0 +0.0
stress R2A with Cobalt chloride 0.02 mM +1.6 +0.1 +0.0 -0.0 +0.0
stress R2A with Trimethoprim 2.5 mM +0.9 +0.3 +0.3 +0.1 +0.2
stress R2A with Gallium(III) chloride 0.02 mM +1.3 +0.4 -0.0 +0.1 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +1.4 -0.1 +0.1 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 +0.4 +0.3 +0.3
phage AgroPhage_D10 +1.2 +0.5 -0.2 +0.4 +0.1
phage AgroPhage_F04 +1.0 +0.9 -0.0 -0.1 +0.3
phage AgroPhage_F10 +1.5 +0.4 +0.4 -0.2 +0.2
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