Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0145	Atu0146	Atu0147	Atu0148	Atu0149
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	-0.0	-0.4	N.D.	-2.2
stress	Erythromycin 12.5 ug/mL	-0.0	+0.1	-0.1	N.D.	-1.8
stress	Erythromycin 12.5 ug/mL	-0.1	+0.1	-0.4	N.D.	-1.4
in planta	Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.0	+0.0	-0.2	N.D.	-1.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.0	+0.0	-0.2	N.D.	-1.5
carbon source	pyruvate (C)	+0.0	+0.0	-0.4	N.D.	-1.3
stress	Chloramphenicol 12.5 ug/mL	+0.1	+0.2	+0.2	N.D.	-2.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.0	-0.7	N.D.	-0.8
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.0	-0.4	N.D.	-1.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.0	+0.1	N.D.	-1.5
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.3	-0.3	N.D.	-1.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.3	-0.3	N.D.	-1.4
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.0	+0.1	N.D.	-1.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.0	+0.2	N.D.	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.0	-0.5	N.D.	-0.9
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.4	-0.3	N.D.	-1.3
in planta	Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.0	-0.1	+0.4	N.D.	-1.4
carbon source	Fumarate (C)	-0.0	+0.1	+0.2	N.D.	-1.4
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.7	-0.6	N.D.	-1.0
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.3	-0.1	N.D.	-1.3
carbon source	Fumarate (C)	+0.1	+0.1	+0.4	N.D.	-1.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	-0.2	+0.4	N.D.	-1.0
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.2	+0.2	N.D.	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	+0.3	-1.2	N.D.	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.5	-0.4	N.D.	-0.8
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.1	+0.4	N.D.	-1.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.2	+0.9	N.D.	-1.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.2	+0.9	N.D.	-1.2
nitrogen source	DL-2-Aminobutyric (N)	+0.1	-0.0	+0.2	N.D.	+1.7
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.2	+0.5	N.D.	+1.0