Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0139	Atu0140	Atu0141	Atu0142	Atu0143
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	-3.4	-3.3	-2.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	-3.4	-2.5	-3.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	N.D.	N.D.	-3.4	-3.4	-1.5
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	N.D.	N.D.	-3.4	-3.2	-1.3
stress	R2A with cyanide 2.5 mM	N.D.	N.D.	-4.4	-3.4	+0.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	-3.2	-2.5	-2.0
stress	methyl jasmonate 5 mM	N.D.	N.D.	-4.2	-3.2	+0.2
stress	methyl jasmonate 5 mM	N.D.	N.D.	-3.4	-3.7	+0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	N.D.	N.D.	-2.7	-2.7	-1.5
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	N.D.	N.D.	-4.2	-2.4	-0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	-1.9	-2.1	-2.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	-2.0	-2.2	-2.1
stress	Chloramphenicol 12.5 ug/mL	N.D.	N.D.	-2.8	-3.4	+0.0
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	-1.8	-2.0	-2.2
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	-3.0	-2.6	-0.1
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	-1.8	-2.0	-1.7
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	-2.2	-2.1	-1.3
in planta	Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	-4.1	-1.3	-0.2
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	-3.9	-1.6	+0.0
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	-3.2	-1.5	-0.7
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	N.D.	N.D.	-3.9	-1.4	-0.1
stress	Chloramphenicol 12.5 ug/mL	N.D.	N.D.	-2.7	-2.7	+0.0
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	-1.9	-2.0	-1.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	-2.0	-2.2	-1.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	N.D.	N.D.	-2.8	-2.2	-0.1
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	-2.1	-1.9	-1.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	-4.3	-0.8	-0.1
	No phage control	N.D.	N.D.	-4.7	+0.5	+0.1
stress	R2A with Vancomycin 0.009 mM	N.D.	N.D.	+4.0	+3.1	-0.1
stress	R2A with Vancomycin 0.009 mM	N.D.	N.D.	+4.3	+3.9	-0.2