Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu0127 and Atu0128 are separated by 7 nucleotidesAtu0128 and Atu0129 are separated by 6 nucleotidesAtu0129 and Atu0130 are separated by 4 nucleotidesAtu0130 and Atu0131 overlap by 1 nucleotides Atu0127: Atu0127 - ABC transporter, nucleotide binding/ATPase protein (sugar/ribonucleotide), at 131,053 to 132,558 Atu0127 Atu0128: Atu0128 - ABC transporter, membrane spanning protein (sugar/ribonucleotide), at 132,566 to 133,669 Atu0128 Atu0129: Atu0129 - ABC transporter, membrane spanning protein (sugar/ribonucleotide), at 133,676 to 134,647 Atu0129 Atu0130: Atu0130 - cytidine deaminase, at 134,652 to 135,056 Atu0130 Atu0131: Atu0131 - purine nucleoside phosphorylase, at 135,056 to 135,856 Atu0131
Group Condition Atu0127 Atu0128 Atu0129 Atu0130 Atu0131
carbon source Uridine 5-monophosphate (C) -1.3 -1.3 -1.4 +0.0 -0.3
carbon source Uridine 5-monophosphate (C) -1.2 -1.3 -1.3 -0.2 -0.1
No phage control +0.3 -0.3 -0.1 -1.1 -0.3
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -0.4 -0.3 -0.6 +0.1 -0.1
nitrogen source DL-2-Aminobutyric (N) -0.3 -0.7 -0.3 +0.1 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 +0.2 -0.8 +0.2
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -0.4 -0.4 -0.6 +0.3 +0.2
stress Erythromycin 12.5 ug/mL +0.4 +0.1 +0.4 -1.5 -0.1
stress Chloramphenicol 12.5 ug/mL +0.2 +0.1 +0.2 -0.9 -0.3
stress R2A with tungstate 375 mM -0.5 -0.3 -0.2 +0.5 -0.0
Atjh10 +0.3 -0.1 +0.1 -0.9 +0.2
nophagecontrol No phage control -0.1 +0.4 +0.1 -1.1 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.2 +0.1 -0.6 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 -0.2 -0.3 +0.4
stress Chloramphenicol 12.5 ug/mL +0.3 +0.4 +0.1 -0.7 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.4 +0.2 -0.4 -0.3
stress Erythromycin 12.5 ug/mL +0.3 +0.2 +0.5 -0.2 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +1.0 +0.6 -0.7 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 +0.3 +0.6 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.4 +0.1 +0.8 -0.2
phage AgroPhage_H03 +0.3 +0.4 +0.5 -0.3 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 +0.2 -0.3 +0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 +0.1 +1.5 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.3 +0.2 +0.5 +0.1
carbon source L-ascorbate (C) +0.3 +0.3 +0.2 +0.6 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 +0.2 +0.1 +0.7
stress R2A with Vancomycin 0.009 mM +1.2 +1.1 +1.3 -1.1 -0.3
carbon source L-ascorbate (C) +0.5 +0.4 +0.4 +0.7 +0.4
stress R2A with Vancomycin 0.009 mM +0.9 +0.9 +1.1 -0.1 +0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 +0.1 +3.0 -0.0
remove
Atu0127
plot		 remove
Atu0128
plot		 remove
Atu0129		 remove
Atu0130
plot		 remove
Atu0131
plot