Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0125	Atu0126	Atu0127	Atu0128	Atu0129
carbon source	Uridine 5-monophosphate (C)	-0.6	-1.5	-1.3	-1.3	-1.4
carbon source	Uridine 5-monophosphate (C)	-0.1	-1.6	-1.2	-1.3	-1.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-4.7	+0.1	-0.1	-0.1	+0.0
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-4.2	-0.7	+0.3	+0.2	+0.0
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-3.1	-0.9	-0.2	-0.2	+0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-4.7	+0.1	+0.5	+0.1	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-3.2	-0.7	-0.3	+0.0	+0.5
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-3.5	+0.4	-0.1	+0.1	+0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.4	-0.5	-0.3	+0.2	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.5	+0.0	-0.3	+0.4	-0.2
stress	R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM	-0.1	-0.9	-0.4	-0.4	-0.6
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.9	-0.0	+0.2	+0.1	+0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.6	+0.1	+0.1	+0.3	+0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.2	+0.2	-0.5	-0.2	-0.2
stress	R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM	+0.3	-0.7	-0.4	-0.3	-0.6
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.2	+0.0	+0.0	+0.4	+0.2
stress	R2A with hypochlorite 6.25 mM	-1.6	-0.2	+0.0	+0.1	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.2	-0.2	+0.2	+0.1	-0.1
stress	R2A with hypochlorite 6.25 mM	-1.5	+0.3	+0.1	-0.1	-0.0
nitrogen source	DL-2-Aminobutyric (N)	+0.6	+0.2	-0.3	-0.7	-0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	-0.8	+0.5	-0.1	-0.2	+0.4
stress	R2A with m-arsenite 0.8 mM	-0.6	+0.6	+0.1	+0.2	-0.4
lb_wheat	LB_wheat	-0.2	+0.5	+0.4	+0.4	+0.4
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	+0.7	+0.3	+0.4	+0.5
carbon source	L-ascorbate (C)	-0.2	+0.7	+0.5	+0.4	+0.4
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.6	+0.5	+0.4	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	+1.0	-0.0	+0.4	+0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.5	+0.4	+1.0	+0.6
stress	R2A with Vancomycin 0.009 mM	+0.1	+0.3	+0.9	+0.9	+1.1
stress	R2A with Vancomycin 0.009 mM	+0.0	+0.9	+1.2	+1.1	+1.3