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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu0120 and Atu0121 are separated by 68 nucleotides
Atu0121 and Atu0122 are separated by 90 nucleotides
Atu0122 and Atu0123 are separated by 306 nucleotides
Atu0123 and Atu0124 are separated by 221 nucleotides
Atu0120: Atu0120 - hypothetical protein, at 124,361 to 124,912
Atu0120
Atu0121: Atu0121 - molecular chaperone, DnaJ family, at 124,981 to 126,114
Atu0121
Atu0122: Atu0122 - DNAK Protein, at 126,205 to 128,106
Atu0122
Atu0123: Atu0123 - tRNA-Ser, at 128,413 to 128,502
Atu0123
Atu0124: Atu0124 - hypothetical protein, at 128,724 to 129,041
Atu0124
Group
Condition
Atu0120
Atu0121
Atu0122
Atu0123
Atu0124
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
N.D.
N.D.
N.D.
-2.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
N.D.
N.D.
N.D.
-1.9
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.4
N.D.
N.D.
N.D.
-1.6
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
N.D.
N.D.
N.D.
-1.8
stress
R2A with hypochlorite 6.25 mM
+0.3
N.D.
N.D.
N.D.
-2.1
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.5
N.D.
N.D.
N.D.
-0.7
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
N.D.
N.D.
N.D.
-0.9
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
N.D.
N.D.
N.D.
-0.9
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
N.D.
N.D.
N.D.
-0.6
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
N.D.
N.D.
N.D.
-0.9
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.0
N.D.
N.D.
N.D.
-0.9
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
N.D.
N.D.
N.D.
-0.8
phage
Phage 100.2 + bactiera
+0.2
N.D.
N.D.
N.D.
-0.8
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
N.D.
N.D.
N.D.
-0.7
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.4
N.D.
N.D.
N.D.
-0.8
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.5
N.D.
N.D.
N.D.
-0.9
in planta
Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
+0.3
N.D.
N.D.
N.D.
-0.7
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.5
N.D.
N.D.
N.D.
+0.6
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
N.D.
N.D.
N.D.
+0.8
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
N.D.
N.D.
N.D.
+0.8
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
N.D.
N.D.
N.D.
+0.8
phage
AgroPhage_A07
+0.3
N.D.
N.D.
N.D.
+0.7
phage
AgroPhage_F10
-0.1
N.D.
N.D.
N.D.
+1.1
carbon source
L-(+)-Erythrulose (C)
+0.2
N.D.
N.D.
N.D.
+0.9
phage
AgroPhage_F04
+0.0
N.D.
N.D.
N.D.
+1.1
stress
R2A with Vancomycin 0.009 mM
-0.0
N.D.
N.D.
N.D.
+1.3
carbon source
sarcosine (C)
-0.1
N.D.
N.D.
N.D.
+1.4
phage
AgroPhage_D10
+0.1
N.D.
N.D.
N.D.
+1.3
phage
AgroPhage_E10
+0.2
N.D.
N.D.
N.D.
+1.5
stress
R2A with Vancomycin 0.009 mM
+0.1
N.D.
N.D.
N.D.
+2.2
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